Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

BTG4 (BTG anti-proliferation factor 4)

Identity

Alias_namesB-cell translocation gene 4
BTG family member 4
Alias_symbol (synonym)PC3B
APRO3
Other alias
HGNC (Hugo) BTG4
LocusID (NCBI) 54766
Atlas_Id 850
Location 11q23.1  [Link to chromosome band 11q23]
Location_base_pair Starts at 111467531 and ends at 111512354 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)BTG4   13862
Cards
Entrez_Gene (NCBI)BTG4  54766  BTG anti-proliferation factor 4
AliasesAPRO3; PC3B
GeneCards (Weizmann)BTG4
Ensembl hg19 (Hinxton)ENSG00000137707 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000137707 [Gene_View]  chr11:111467531-111512354 [Contig_View]  BTG4 [Vega]
ICGC DataPortalENSG00000137707
TCGA cBioPortalBTG4
AceView (NCBI)BTG4
Genatlas (Paris)BTG4
WikiGenes54766
SOURCE (Princeton)BTG4
Genetics Home Reference (NIH)BTG4
Genomic and cartography
GoldenPath hg38 (UCSC)BTG4  -     chr11:111467531-111512354 -  11q23.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)BTG4  -     11q23.1   [Description]    (hg19-Feb_2009)
EnsemblBTG4 - 11q23.1 [CytoView hg19]  BTG4 - 11q23.1 [CytoView hg38]
Mapping of homologs : NCBIBTG4 [Mapview hg19]  BTG4 [Mapview hg38]
OMIM605673   
Gene and transcription
Genbank (Entrez)AJ271351 BC022056 BC031045 BX099301 DQ890978
RefSeq transcript (Entrez)NM_017589
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)BTG4
Cluster EST : UnigeneHs.734027 [ NCBI ]
CGAP (NCI)Hs.734027
Alternative Splicing GalleryENSG00000137707
Gene ExpressionBTG4 [ NCBI-GEO ]   BTG4 [ EBI - ARRAY_EXPRESS ]   BTG4 [ SEEK ]   BTG4 [ MEM ]
Gene Expression Viewer (FireBrowse)BTG4 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)54766
GTEX Portal (Tissue expression)BTG4
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9NY30   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9NY30  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9NY30
Splice isoforms : SwissVarQ9NY30
PhosPhoSitePlusQ9NY30
Domaine pattern : Prosite (Expaxy)BTG_1 (PS00960)    BTG_2 (PS01203)   
Domains : Interpro (EBI)Anti_prolifrtn    BTG4   
Domain families : Pfam (Sanger)BTG (PF07742)   
Domain families : Pfam (NCBI)pfam07742   
Domain families : Smart (EMBL)btg1 (SM00099)  
Conserved Domain (NCBI)BTG4
DMDM Disease mutations54766
Blocks (Seattle)BTG4
SuperfamilyQ9NY30
Human Protein AtlasENSG00000137707
Peptide AtlasQ9NY30
HPRD16138
IPIIPI00020670   IPI00168676   IPI00978003   
Protein Interaction databases
DIP (DOE-UCLA)Q9NY30
IntAct (EBI)Q9NY30
FunCoupENSG00000137707
BioGRIDBTG4
STRING (EMBL)BTG4
ZODIACBTG4
Ontologies - Pathways
QuickGOQ9NY30
Ontology : AmiGOcellular_component  cell cycle arrest  negative regulation of cell proliferation  neuron differentiation  negative regulation of mitotic cell cycle  
Ontology : EGO-EBIcellular_component  cell cycle arrest  negative regulation of cell proliferation  neuron differentiation  negative regulation of mitotic cell cycle  
Pathways : KEGGRNA degradation   
NDEx NetworkBTG4
Atlas of Cancer Signalling NetworkBTG4
Wikipedia pathwaysBTG4
Orthology - Evolution
OrthoDB54766
GeneTree (enSembl)ENSG00000137707
Phylogenetic Trees/Animal Genes : TreeFamBTG4
HOVERGENQ9NY30
HOGENOMQ9NY30
Homologs : HomoloGeneBTG4
Homology/Alignments : Family Browser (UCSC)BTG4
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerBTG4 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)BTG4
dbVarBTG4
ClinVarBTG4
1000_GenomesBTG4 
Exome Variant ServerBTG4
ExAC (Exome Aggregation Consortium)BTG4 (select the gene name)
Genetic variants : HAPMAP54766
Genomic Variants (DGV)BTG4 [DGVbeta]
DECIPHERBTG4 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisBTG4 
Mutations
ICGC Data PortalBTG4 
TCGA Data PortalBTG4 
Broad Tumor PortalBTG4
OASIS PortalBTG4 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICBTG4  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDBTG4
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch BTG4
DgiDB (Drug Gene Interaction Database)BTG4
DoCM (Curated mutations)BTG4 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)BTG4 (select a term)
intoGenBTG4
Cancer3DBTG4(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM605673   
Orphanet
MedgenBTG4
Genetic Testing Registry BTG4
NextProtQ9NY30 [Medical]
TSGene54766
GENETestsBTG4
Target ValidationBTG4
Huge Navigator BTG4 [HugePedia]
snp3D : Map Gene to Disease54766
BioCentury BCIQBTG4
ClinGenBTG4
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD54766
Chemical/Pharm GKB GenePA25453
Clinical trialBTG4
Miscellaneous
canSAR (ICR)BTG4 (select the gene name)
Probes
Litterature
PubMed9 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineBTG4
EVEXBTG4
GoPubMedBTG4
iHOPBTG4
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Aug 1 16:56:19 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.