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BTNL10 (butyrophilin-like 10)

Identity

Alias_namesbutyrophilin-like 10
Alias_symbol (synonym)BUTR1
BTN4
Other alias
HGNC (Hugo) BTNL10
LocusID (NCBI) 100129094
Atlas_Id 60840
Location 1q42.13  [Link to chromosome band 1q42]
Location_base_pair Starts at 228698060 and ends at 228699989 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)BTNL10   42540
Cards
Entrez_Gene (NCBI)BTNL10  100129094  butyrophilin-like 10
AliasesBTN4; BUTR1
GeneCards (Weizmann)BTNL10
Ensembl hg19 (Hinxton) [Gene_View]  chr1:228698060-228699989 [Contig_View]  BTNL10 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr1:228698060-228699989 [Contig_View]  BTNL10 [Vega]
TCGA cBioPortalBTNL10
AceView (NCBI)BTNL10
Genatlas (Paris)BTNL10
WikiGenes100129094
SOURCE (Princeton)BTNL10
Genetics Home Reference (NIH)BTNL10
Genomic and cartography
GoldenPath hg19 (UCSC)BTNL10  -     chr1:228698060-228699989 -  1q42.13   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)BTNL10  -     1q42.13   [Description]    (hg38-Dec_2013)
EnsemblBTNL10 - 1q42.13 [CytoView hg19]  BTNL10 - 1q42.13 [CytoView hg38]
Mapping of homologs : NCBIBTNL10 [Mapview hg19]  BTNL10 [Mapview hg38]
Gene and transcription
Genbank (Entrez)DY654633
RefSeq transcript (Entrez)NM_001287262
RefSeq genomic (Entrez)NC_000001 NC_018912 NT_167186 NW_004929294
Consensus coding sequences : CCDS (NCBI)BTNL10
Cluster EST : UnigeneHs.730208 [ NCBI ]
CGAP (NCI)Hs.730208
Gene ExpressionBTNL10 [ NCBI-GEO ]   BTNL10 [ EBI - ARRAY_EXPRESS ]   BTNL10 [ SEEK ]   BTNL10 [ MEM ]
Gene Expression Viewer (FireBrowse)BTNL10 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100129094
GTEX Portal (Tissue expression)BTNL10
Protein : pattern, domain, 3D structure
UniProt/SwissProtA8MVZ5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA8MVZ5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA8MVZ5
Splice isoforms : SwissVarA8MVZ5
PhosPhoSitePlusA8MVZ5
Domaine pattern : Prosite (Expaxy)IG_LIKE (PS50835)   
Domains : Interpro (EBI)Ig-like_dom    Ig-like_fold    Ig_sub    Ig_V-set   
Domain families : Pfam (Sanger)V-set (PF07686)   
Domain families : Pfam (NCBI)pfam07686   
Domain families : Smart (EMBL)IG (SM00409)  
Conserved Domain (NCBI)BTNL10
DMDM Disease mutations100129094
Blocks (Seattle)BTNL10
SuperfamilyA8MVZ5
Peptide AtlasA8MVZ5
IPIIPI00917528   IPI00874100   
Protein Interaction databases
DIP (DOE-UCLA)A8MVZ5
IntAct (EBI)A8MVZ5
BioGRIDBTNL10
STRING (EMBL)BTNL10
ZODIACBTNL10
Ontologies - Pathways
QuickGOA8MVZ5
Ontology : AmiGOintegral component of membrane  
Ontology : EGO-EBIintegral component of membrane  
NDEx NetworkBTNL10
Atlas of Cancer Signalling NetworkBTNL10
Wikipedia pathwaysBTNL10
Orthology - Evolution
OrthoDB100129094
Phylogenetic Trees/Animal Genes : TreeFamBTNL10
HOVERGENA8MVZ5
HOGENOMA8MVZ5
Homologs : HomoloGeneBTNL10
Homology/Alignments : Family Browser (UCSC)BTNL10
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerBTNL10 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)BTNL10
dbVarBTNL10
ClinVarBTNL10
1000_GenomesBTNL10 
Exome Variant ServerBTNL10
ExAC (Exome Aggregation Consortium)BTNL10 (select the gene name)
Genetic variants : HAPMAP100129094
Genomic Variants (DGV)BTNL10 [DGVbeta]
DECIPHER (Syndromes)1:228698060-228699989  
CONAN: Copy Number AnalysisBTNL10 
Mutations
ICGC Data PortalBTNL10 
TCGA Data PortalBTNL10 
Broad Tumor PortalBTNL10
OASIS PortalBTNL10 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDBTNL10
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch BTNL10
DgiDB (Drug Gene Interaction Database)BTNL10
DoCM (Curated mutations)BTNL10 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)BTNL10 (select a term)
intoGenBTNL10
Cancer3DBTNL10(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenBTNL10
Genetic Testing Registry BTNL10
NextProtA8MVZ5 [Medical]
TSGene100129094
GENETestsBTNL10
Huge Navigator BTNL10 [HugePedia]
snp3D : Map Gene to Disease100129094
BioCentury BCIQBTNL10
ClinGenBTNL10
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100129094
Clinical trialBTNL10
Miscellaneous
canSAR (ICR)BTNL10 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineBTNL10
EVEXBTNL10
GoPubMedBTNL10
iHOPBTNL10
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 11:56:09 CET 2017

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