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BVES-AS1 (BVES antisense RNA 1)

Identity

Alias_namesC6orf112
chromosome 6 open reading frame 112
BVES antisense RNA 1 (non-protein coding)
Alias_symbol (synonym)bA99L11.2
Other alias
HGNC (Hugo) BVES-AS1
LocusID (NCBI) 154442
Atlas_Id 60844
Location 6q21  [Link to chromosome band 6q21]
Location_base_pair Starts at 105137687 and ends at 105169944 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)BVES-AS1   21223
Cards
Entrez_Gene (NCBI)BVES-AS1  154442  BVES antisense RNA 1
AliasesC6orf112; bA99L11.2
GeneCards (Weizmann)BVES-AS1
Ensembl hg19 (Hinxton)ENSG00000203808 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000203808 [Gene_View]  ENSG00000203808 [Sequence]  chr6:105137687-105169944 [Contig_View]  BVES-AS1 [Vega]
ICGC DataPortalENSG00000203808
TCGA cBioPortalBVES-AS1
AceView (NCBI)BVES-AS1
Genatlas (Paris)BVES-AS1
WikiGenes154442
SOURCE (Princeton)BVES-AS1
Genetics Home Reference (NIH)BVES-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)BVES-AS1  -     chr6:105137687-105169944 +  6q21   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)BVES-AS1  -     6q21   [Description]    (hg19-Feb_2009)
EnsemblBVES-AS1 - 6q21 [CytoView hg19]  BVES-AS1 - 6q21 [CytoView hg38]
Mapping of homologs : NCBIBVES-AS1 [Mapview hg19]  BVES-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AL137368
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)BVES-AS1
Cluster EST : UnigeneHs.586271 [ NCBI ]
CGAP (NCI)Hs.586271
Alternative Splicing GalleryENSG00000203808
Gene ExpressionBVES-AS1 [ NCBI-GEO ]   BVES-AS1 [ EBI - ARRAY_EXPRESS ]   BVES-AS1 [ SEEK ]   BVES-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)BVES-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)154442
GTEX Portal (Tissue expression)BVES-AS1
Human Protein AtlasENSG00000203808-BVES-AS1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ5T3Y7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ5T3Y7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ5T3Y7
Splice isoforms : SwissVarQ5T3Y7
PhosPhoSitePlusQ5T3Y7
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)BVES-AS1
DMDM Disease mutations154442
Blocks (Seattle)BVES-AS1
SuperfamilyQ5T3Y7
Human Protein Atlas [tissue]ENSG00000203808-BVES-AS1 [tissue]
Peptide AtlasQ5T3Y7
IPIIPI00513932   IPI00641390   
Protein Interaction databases
DIP (DOE-UCLA)Q5T3Y7
IntAct (EBI)Q5T3Y7
FunCoupENSG00000203808
BioGRIDBVES-AS1
STRING (EMBL)BVES-AS1
ZODIACBVES-AS1
Ontologies - Pathways
QuickGOQ5T3Y7
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkBVES-AS1
Atlas of Cancer Signalling NetworkBVES-AS1
Wikipedia pathwaysBVES-AS1
Orthology - Evolution
OrthoDB154442
GeneTree (enSembl)ENSG00000203808
Phylogenetic Trees/Animal Genes : TreeFamBVES-AS1
HOVERGENQ5T3Y7
HOGENOMQ5T3Y7
Homologs : HomoloGeneBVES-AS1
Homology/Alignments : Family Browser (UCSC)BVES-AS1
Gene fusions - Rearrangements
Fusion : QuiverBVES-AS1
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerBVES-AS1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)BVES-AS1
dbVarBVES-AS1
ClinVarBVES-AS1
1000_GenomesBVES-AS1 
Exome Variant ServerBVES-AS1
ExAC (Exome Aggregation Consortium)ENSG00000203808
GNOMAD BrowserENSG00000203808
Varsome BrowserBVES-AS1
Genetic variants : HAPMAP154442
Genomic Variants (DGV)BVES-AS1 [DGVbeta]
DECIPHERBVES-AS1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisBVES-AS1 
Mutations
ICGC Data PortalBVES-AS1 
TCGA Data PortalBVES-AS1 
Broad Tumor PortalBVES-AS1
OASIS PortalBVES-AS1 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDBVES-AS1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch BVES-AS1
DgiDB (Drug Gene Interaction Database)BVES-AS1
DoCM (Curated mutations)BVES-AS1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)BVES-AS1 (select a term)
intoGenBVES-AS1
Cancer3DBVES-AS1(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETBVES-AS1
MedgenBVES-AS1
Genetic Testing Registry BVES-AS1
NextProtQ5T3Y7 [Medical]
TSGene154442
GENETestsBVES-AS1
Target ValidationBVES-AS1
Huge Navigator BVES-AS1 [HugePedia]
snp3D : Map Gene to Disease154442
BioCentury BCIQBVES-AS1
ClinGenBVES-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD154442
Chemical/Pharm GKB GenePA134909137
Clinical trialBVES-AS1
Miscellaneous
canSAR (ICR)BVES-AS1 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineBVES-AS1
EVEXBVES-AS1
GoPubMedBVES-AS1
iHOPBVES-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Jul 30 13:37:11 CEST 2018

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