Atlas of Genetics and Cytogenetics in Oncology and Haematology


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BZW1 (basic leucine zipper and W2 domains 1)

Identity

Alias_symbol (synonym)BZAP45
KIAA0005
Other aliasNbla10236
HGNC (Hugo) BZW1
LocusID (NCBI) 9689
Atlas_Id 60847
Location 2q33.1  [Link to chromosome band 2q33]
Location_base_pair Starts at 200811546 and ends at 200823846 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
BZW1 (2q33.1) / CLPTM1L (5p15.33)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)BZW1   18380
Cards
Entrez_Gene (NCBI)BZW1  9689  basic leucine zipper and W2 domains 1
AliasesBZAP45; Nbla10236
GeneCards (Weizmann)BZW1
Ensembl hg19 (Hinxton)ENSG00000082153 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000082153 [Gene_View]  chr2:200811546-200823846 [Contig_View]  BZW1 [Vega]
ICGC DataPortalENSG00000082153
TCGA cBioPortalBZW1
AceView (NCBI)BZW1
Genatlas (Paris)BZW1
WikiGenes9689
SOURCE (Princeton)BZW1
Genetics Home Reference (NIH)BZW1
Genomic and cartography
GoldenPath hg38 (UCSC)BZW1  -     chr2:200811546-200823846 +  2q33.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)BZW1  -     2q33.1   [Description]    (hg19-Feb_2009)
EnsemblBZW1 - 2q33.1 [CytoView hg19]  BZW1 - 2q33.1 [CytoView hg38]
Mapping of homologs : NCBIBZW1 [Mapview hg19]  BZW1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA868237 AB074176 AK096489 AK223245 AK297227
RefSeq transcript (Entrez)NM_001207067 NM_001207068 NM_001207069 NM_001321688 NM_001321690 NM_001321691 NM_001321693 NM_001321694 NM_014670
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)BZW1
Cluster EST : UnigeneHs.736074 [ NCBI ]
CGAP (NCI)Hs.736074
Alternative Splicing GalleryENSG00000082153
Gene ExpressionBZW1 [ NCBI-GEO ]   BZW1 [ EBI - ARRAY_EXPRESS ]   BZW1 [ SEEK ]   BZW1 [ MEM ]
Gene Expression Viewer (FireBrowse)BZW1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)9689
GTEX Portal (Tissue expression)BZW1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ7L1Q6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ7L1Q6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ7L1Q6
Splice isoforms : SwissVarQ7L1Q6
PhosPhoSitePlusQ7L1Q6
Domaine pattern : Prosite (Expaxy)W2 (PS51363)   
Domains : Interpro (EBI)ARM-type_fold    MIF4-like    W2_domain   
Domain families : Pfam (Sanger)W2 (PF02020)   
Domain families : Pfam (NCBI)pfam02020   
Domain families : Smart (EMBL)eIF5C (SM00515)  
Conserved Domain (NCBI)BZW1
DMDM Disease mutations9689
Blocks (Seattle)BZW1
SuperfamilyQ7L1Q6
Human Protein AtlasENSG00000082153
Peptide AtlasQ7L1Q6
HPRD16570
IPIIPI00785096   IPI00180128   IPI00903257   IPI00917597   IPI00916112   IPI00916503   IPI00915826   IPI00916588   IPI00916463   IPI00916338   
Protein Interaction databases
DIP (DOE-UCLA)Q7L1Q6
IntAct (EBI)Q7L1Q6
FunCoupENSG00000082153
BioGRIDBZW1
STRING (EMBL)BZW1
ZODIACBZW1
Ontologies - Pathways
QuickGOQ7L1Q6
Ontology : AmiGORNA binding  cytoplasm  transcription, DNA-templated  regulation of transcription, DNA-templated  membrane  cadherin binding  
Ontology : EGO-EBIRNA binding  cytoplasm  transcription, DNA-templated  regulation of transcription, DNA-templated  membrane  cadherin binding  
NDEx NetworkBZW1
Atlas of Cancer Signalling NetworkBZW1
Wikipedia pathwaysBZW1
Orthology - Evolution
OrthoDB9689
GeneTree (enSembl)ENSG00000082153
Phylogenetic Trees/Animal Genes : TreeFamBZW1
HOVERGENQ7L1Q6
HOGENOMQ7L1Q6
Homologs : HomoloGeneBZW1
Homology/Alignments : Family Browser (UCSC)BZW1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerBZW1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)BZW1
dbVarBZW1
ClinVarBZW1
1000_GenomesBZW1 
Exome Variant ServerBZW1
ExAC (Exome Aggregation Consortium)BZW1 (select the gene name)
Genetic variants : HAPMAP9689
Genomic Variants (DGV)BZW1 [DGVbeta]
DECIPHERBZW1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisBZW1 
Mutations
ICGC Data PortalBZW1 
TCGA Data PortalBZW1 
Broad Tumor PortalBZW1
OASIS PortalBZW1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICBZW1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDBZW1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch BZW1
DgiDB (Drug Gene Interaction Database)BZW1
DoCM (Curated mutations)BZW1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)BZW1 (select a term)
intoGenBZW1
Cancer3DBZW1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenBZW1
Genetic Testing Registry BZW1
NextProtQ7L1Q6 [Medical]
TSGene9689
GENETestsBZW1
Target ValidationBZW1
Huge Navigator BZW1 [HugePedia]
snp3D : Map Gene to Disease9689
BioCentury BCIQBZW1
ClinGenBZW1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD9689
Chemical/Pharm GKB GenePA38535
Clinical trialBZW1
Miscellaneous
canSAR (ICR)BZW1 (select the gene name)
Probes
Litterature
PubMed31 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineBZW1
EVEXBZW1
GoPubMedBZW1
iHOPBZW1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:02:33 CEST 2017

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