Atlas of Genetics and Cytogenetics in Oncology and Haematology

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C10orf118 (chromosome 10 open reading frame 118)

Identity

Other names-
HGNC (Hugo) C10orf118
LocusID (NCBI) 55088
Location 10q25.3
Location_base_pair Starts at 115881974 and ends at 115934364 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)C10orf118   24349
Entrez_Gene (NCBI)C10orf118  55088  chromosome 10 open reading frame 118
Cards
GeneCards (Weizmann)C10orf118
Ensembl (Hinxton)ENSG00000165813 [Gene_View]  chr10:115881974-115934364 [Contig_View]  C10orf118 [Vega]
AceView (NCBI)C10orf118
Genatlas (Paris)C10orf118
SOURCE (Stanford)NM_018017
Genomic and cartography
GoldenPath (UCSC)C10orf118  -  10q25.3   chr10:115881974-115934364 -  10q25.3   [Description]    (hg19-Feb_2009)
EnsemblC10orf118 - 10q25.3 [CytoView]
Mapping of homologs : NCBIC10orf118 [Mapview]
Gene and transcription
Genbank (Entrez)AF273054 AI143965 AK001050 AK024739 AK057508
RefSeq transcript (SRS)NM_018017
RefSeq transcript (Entrez)NM_018017
RefSeq genomic (SRS)AC_000142 NC_000010 NC_018921 NT_030059 NW_001838006 NW_004078068
RefSeq genomic (Entrez)AC_000142 NC_000010 NC_018921 NT_030059 NW_001838006 NW_004078068
Consensus coding sequences : CCDS (NCBI)C10orf118
Cluster EST : UnigeneHs.603328 [ SRS ] Hs.603328 [ NCBI ]
CGAP (NCI)Hs.603328
Alternative Splicing : Fast-db (Paris)GSHG0004380
Alternative Splicing GalleryENSG00000165813
Gene ExpressionC10orf118 [ NCBI-GEO ]   C10orf118 [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ7Z3E2 (SRS) Q7Z3E2 (Uniprot)
NextProtQ7Z3E2
With graphics : InterProQ7Z3E2
Splice isoforms : SwissVarQ7Z3E2(Swissvar)
Related proteins : CluSTrQ7Z3E2
Domain families : Pfam (SRS)
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
DMDM55088
Blocks (Seattle)Q7Z3E2
Human Protein AtlasENSG00000165813
HPRD16576
IPIIPI00947080   IPI00639861   IPI00470582   IPI01011194   IPI00816151   
Protein Interaction databases
DIP (DOE-UCLA)Q7Z3E2
IntAct (EBI)Q7Z3E2
FunCoupENSG00000165813
REACTOMEC10orf118
Protein Interaction Database55088
BioGRIDC10orf118
InParanoidQ7Z3E2
Interologous Interaction database Q7Z3E2
IntegromeDBC10orf118
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)C10orf118
SNP (GeneSNP Utah)C10orf118
SNP : HGBaseC10orf118
Genetic variants : HAPMAPC10orf118
Somatic Mutations in Cancer : COSMICC10orf118 
CONAN: Copy Number AnalysisC10orf118 
Mutations and Diseases : HGMDC10orf118
OMIM
GENETests
Disease Genetic AssociationC10orf118
Huge Navigator C10orf118 [HugePedia]  C10orf118 [HugeCancerGEM]
Genomic VariantsC10orf118  C10orf118 [DGVbeta]
snp3D : Map Gene to Disease55088
General knowledge
Homologs : HomoloGeneC10orf118
Homology/Alignments : Family Browser (UCSC)C10orf118
Phylogenetic Trees/Animal Genes : TreeFamC10orf118
Chemical/Protein Interactions : CTD55088
Chemical/Pharm GKB GenePA134904295
Clinical trialC10orf118
Cancer Resource (Charite)ENSG00000165813
Ontology : AmiGO
Ontology : EGO-EBI
Other databases
Probes
Litterature
PubMed13 Pubmed reference(s) in Entrez
PubGeneC10orf118
iHOPC10orf118
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated01-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 1 12:28:41 CEST 2013
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