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C10orf120 (chromosome 10 open reading frame 120)

Identity

Alias (NCBI)bA318C4.1
HGNC (Hugo) C10orf120
HGNC Alias symbbA318C4.1
LocusID (NCBI) 399814
Atlas_Id 60856
Location 10q26.13  [Link to chromosome band 10q26]
Location_base_pair Starts at 122697709 and ends at 122699846 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
NT5C2 (10q24.32) / C10orf120 (10q26.13)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)C10orf120   25707
Cards
Entrez_Gene (NCBI)C10orf120    chromosome 10 open reading frame 120
AliasesbA318C4.1
GeneCards (Weizmann)C10orf120
Ensembl hg19 (Hinxton)ENSG00000183559 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000183559 [Gene_View]  ENSG00000183559 [Sequence]  chr10:122697709-122699846 [Contig_View]  C10orf120 [Vega]
ICGC DataPortalENSG00000183559
TCGA cBioPortalC10orf120
AceView (NCBI)C10orf120
Genatlas (Paris)C10orf120
SOURCE (Princeton)C10orf120
Genetics Home Reference (NIH)C10orf120
Genomic and cartography
GoldenPath hg38 (UCSC)C10orf120  -     chr10:122697709-122699846 -  10q26.13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)C10orf120  -     10q26.13   [Description]    (hg19-Feb_2009)
GoldenPathC10orf120 - 10q26.13 [CytoView hg19]  C10orf120 - 10q26.13 [CytoView hg38]
ImmunoBaseENSG00000183559
Genome Data Viewer NCBIC10orf120 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AL704711 BC065903 BC140922
RefSeq transcript (Entrez)NM_001010912
Consensus coding sequences : CCDS (NCBI)C10orf120
Gene ExpressionC10orf120 [ NCBI-GEO ]   C10orf120 [ EBI - ARRAY_EXPRESS ]   C10orf120 [ SEEK ]   C10orf120 [ MEM ]
Gene Expression Viewer (FireBrowse)C10orf120 [ Firebrowse - Broad ]
GenevisibleExpression of C10orf120 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)399814
GTEX Portal (Tissue expression)C10orf120
Human Protein AtlasENSG00000183559-C10orf120 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ5SQS8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ5SQS8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ5SQS8
PhosPhoSitePlusQ5SQS8
Domains : Interpro (EBI)DUF5520   
Domain families : Pfam (Sanger)DUF5520 (PF17658)   
Domain families : Pfam (NCBI)pfam17658   
Conserved Domain (NCBI)C10orf120
SuperfamilyQ5SQS8
AlphaFold pdb e-kbQ5SQS8   
Human Protein Atlas [tissue]ENSG00000183559-C10orf120 [tissue]
HPRD16577
Protein Interaction databases
DIP (DOE-UCLA)Q5SQS8
IntAct (EBI)Q5SQS8
BioGRIDC10orf120
STRING (EMBL)C10orf120
ZODIACC10orf120
Ontologies - Pathways
QuickGOQ5SQS8
Ontology : AmiGOprotein binding  
Ontology : EGO-EBIprotein binding  
NDEx NetworkC10orf120
Atlas of Cancer Signalling NetworkC10orf120
Wikipedia pathwaysC10orf120
Orthology - Evolution
OrthoDB399814
GeneTree (enSembl)ENSG00000183559
Phylogenetic Trees/Animal Genes : TreeFamC10orf120
Homologs : HomoloGeneC10orf120
Homology/Alignments : Family Browser (UCSC)C10orf120
Gene fusions - Rearrangements
Fusion : QuiverC10orf120
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerC10orf120 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)C10orf120
dbVarC10orf120
ClinVarC10orf120
MonarchC10orf120
1000_GenomesC10orf120 
Exome Variant ServerC10orf120
GNOMAD BrowserENSG00000183559
Varsome BrowserC10orf120
ACMGC10orf120 variants
VarityQ5SQS8
Genomic Variants (DGV)C10orf120 [DGVbeta]
DECIPHERC10orf120 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisC10orf120 
Mutations
ICGC Data PortalC10orf120 
TCGA Data PortalC10orf120 
Broad Tumor PortalC10orf120
OASIS PortalC10orf120 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICC10orf120  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DC10orf120
Mutations and Diseases : HGMDC10orf120
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaC10orf120
DgiDB (Drug Gene Interaction Database)C10orf120
DoCM (Curated mutations)C10orf120
CIViC (Clinical Interpretations of Variants in Cancer)C10orf120
Cancer3DC10orf120
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETC10orf120
MedgenC10orf120
Genetic Testing Registry C10orf120
NextProtQ5SQS8 [Medical]
GENETestsC10orf120
Target ValidationC10orf120
Huge Navigator C10orf120 [HugePedia]
ClinGenC10orf120
Clinical trials, drugs, therapy
MyCancerGenomeC10orf120
Protein Interactions : CTDC10orf120
Pharm GKB GenePA134871711
PharosQ5SQS8
Clinical trialC10orf120
Miscellaneous
canSAR (ICR)C10orf120
HarmonizomeC10orf120
DataMed IndexC10orf120
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXC10orf120
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:43:40 CEST 2021

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