Atlas of Genetics and Cytogenetics in Oncology and Haematology


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C10orf126 (chromosome 10 open reading frame 126)

Identity

Alias_symbol (synonym)MGC45541
bA492M23.1
Other alias
HGNC (Hugo) C10orf126
LocusID (NCBI) 283080
Atlas_Id 60857
Location 10p12.1  [Link to chromosome band 10p12]
Location_base_pair Starts at 28846408 and ends at 28881897 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)C10orf126   28693
Cards
Entrez_Gene (NCBI)C10orf126  283080  chromosome 10 open reading frame 126
AliasesbA492M23.1
GeneCards (Weizmann)C10orf126
Ensembl hg19 (Hinxton)ENSG00000204365 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000204365 [Gene_View]  chr10:28846408-28881897 [Contig_View]  C10orf126 [Vega]
ICGC DataPortalENSG00000204365
TCGA cBioPortalC10orf126
AceView (NCBI)C10orf126
Genatlas (Paris)C10orf126
WikiGenes283080
SOURCE (Princeton)C10orf126
Genetics Home Reference (NIH)C10orf126
Genomic and cartography
GoldenPath hg38 (UCSC)C10orf126  -     chr10:28846408-28881897 +  10p12.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)C10orf126  -     10p12.1   [Description]    (hg19-Feb_2009)
EnsemblC10orf126 - 10p12.1 [CytoView hg19]  C10orf126 - 10p12.1 [CytoView hg38]
Mapping of homologs : NCBIC10orf126 [Mapview hg19]  C10orf126 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC033839 DQ891275 DQ894463
RefSeq transcript (Entrez)NM_001278522
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)C10orf126
Alternative Splicing GalleryENSG00000204365
Gene ExpressionC10orf126 [ NCBI-GEO ]   C10orf126 [ EBI - ARRAY_EXPRESS ]   C10orf126 [ SEEK ]   C10orf126 [ MEM ]
Gene Expression Viewer (FireBrowse)C10orf126 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)283080
GTEX Portal (Tissue expression)C10orf126
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N4M7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N4M7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N4M7
Splice isoforms : SwissVarQ8N4M7
PhosPhoSitePlusQ8N4M7
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)C10orf126
DMDM Disease mutations283080
Blocks (Seattle)C10orf126
SuperfamilyQ8N4M7
Human Protein AtlasENSG00000204365
Peptide AtlasQ8N4M7
IPIIPI00166728   
Protein Interaction databases
DIP (DOE-UCLA)Q8N4M7
IntAct (EBI)Q8N4M7
FunCoupENSG00000204365
BioGRIDC10orf126
STRING (EMBL)C10orf126
ZODIACC10orf126
Ontologies - Pathways
QuickGOQ8N4M7
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkC10orf126
Atlas of Cancer Signalling NetworkC10orf126
Wikipedia pathwaysC10orf126
Orthology - Evolution
OrthoDB283080
GeneTree (enSembl)ENSG00000204365
Phylogenetic Trees/Animal Genes : TreeFamC10orf126
HOVERGENQ8N4M7
HOGENOMQ8N4M7
Homologs : HomoloGeneC10orf126
Homology/Alignments : Family Browser (UCSC)C10orf126
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerC10orf126 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)C10orf126
dbVarC10orf126
ClinVarC10orf126
1000_GenomesC10orf126 
Exome Variant ServerC10orf126
ExAC (Exome Aggregation Consortium)C10orf126 (select the gene name)
Genetic variants : HAPMAP283080
Genomic Variants (DGV)C10orf126 [DGVbeta]
DECIPHERC10orf126 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisC10orf126 
Mutations
ICGC Data PortalC10orf126 
TCGA Data PortalC10orf126 
Broad Tumor PortalC10orf126
OASIS PortalC10orf126 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICC10orf126  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDC10orf126
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
BioMutasearch C10orf126
DgiDB (Drug Gene Interaction Database)C10orf126
DoCM (Curated mutations)C10orf126 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)C10orf126 (select a term)
intoGenC10orf126
Cancer3DC10orf126(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenC10orf126
Genetic Testing Registry C10orf126
NextProtQ8N4M7 [Medical]
TSGene283080
GENETestsC10orf126
Target ValidationC10orf126
Huge Navigator C10orf126 [HugePedia]
snp3D : Map Gene to Disease283080
BioCentury BCIQC10orf126
ClinGenC10orf126
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD283080
Chemical/Pharm GKB GenePA134979977
Clinical trialC10orf126
Miscellaneous
canSAR (ICR)C10orf126 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineC10orf126
EVEXC10orf126
GoPubMedC10orf126
iHOPC10orf126
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:02:34 CEST 2017

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