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C10orf131 (chromosome 10 open reading frame 131)

Identity

Alias_symbol (synonym)bA690P14.3
Other alias
HGNC (Hugo) C10orf131
LocusID (NCBI) 100127889
Atlas_Id 60859
Location 10q24.1  [Link to chromosome band 10q24]
Location_base_pair Starts at 97667722 and ends at 97698415 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
LCOR (10q24.1) / C10orf131 (10q24.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)C10orf131   31667
Cards
Entrez_Gene (NCBI)C10orf131  100127889  chromosome 10 open reading frame 131
AliasesbA690P14.3
GeneCards (Weizmann)C10orf131
Ensembl hg19 (Hinxton)ENSG00000173088 [Gene_View]  chr10:97667722-97698415 [Contig_View]  C10orf131 [Vega]
Ensembl hg38 (Hinxton)ENSG00000173088 [Gene_View]  chr10:97667722-97698415 [Contig_View]  C10orf131 [Vega]
ICGC DataPortalENSG00000173088
TCGA cBioPortalC10orf131
AceView (NCBI)C10orf131
Genatlas (Paris)C10orf131
WikiGenes100127889
SOURCE (Princeton)C10orf131
Genetics Home Reference (NIH)C10orf131
Genomic and cartography
GoldenPath hg19 (UCSC)C10orf131  -     chr10:97667722-97698415 +  10q24.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)C10orf131  -     10q24.1   [Description]    (hg38-Dec_2013)
EnsemblC10orf131 - 10q24.1 [CytoView hg19]  C10orf131 - 10q24.1 [CytoView hg38]
Mapping of homologs : NCBIC10orf131 [Mapview hg19]  C10orf131 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK294399
RefSeq transcript (Entrez)NM_001098847 NM_001130446
RefSeq genomic (Entrez)NC_000010 NC_018921 NT_030059 NW_004929376
Consensus coding sequences : CCDS (NCBI)C10orf131
Cluster EST : UnigeneHs.719076 [ NCBI ]
CGAP (NCI)Hs.719076
Alternative Splicing GalleryENSG00000173088
Gene ExpressionC10orf131 [ NCBI-GEO ]   C10orf131 [ EBI - ARRAY_EXPRESS ]   C10orf131 [ SEEK ]   C10orf131 [ MEM ]
Gene Expression Viewer (FireBrowse)C10orf131 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100127889
GTEX Portal (Tissue expression)C10orf131
Protein : pattern, domain, 3D structure
UniProt/SwissProtA6NCD4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA6NCD4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA6NCD4
Splice isoforms : SwissVarA6NCD4
PhosPhoSitePlusA6NCD4
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)C10orf131
DMDM Disease mutations100127889
Blocks (Seattle)C10orf131
SuperfamilyA6NCD4
Human Protein AtlasENSG00000173088
Peptide AtlasA6NCD4
IPIIPI00164170   
Protein Interaction databases
DIP (DOE-UCLA)A6NCD4
IntAct (EBI)A6NCD4
FunCoupENSG00000173088
BioGRIDC10orf131
STRING (EMBL)C10orf131
ZODIACC10orf131
Ontologies - Pathways
QuickGOA6NCD4
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkC10orf131
Atlas of Cancer Signalling NetworkC10orf131
Wikipedia pathwaysC10orf131
Orthology - Evolution
OrthoDB100127889
GeneTree (enSembl)ENSG00000173088
Phylogenetic Trees/Animal Genes : TreeFamC10orf131
HOVERGENA6NCD4
HOGENOMA6NCD4
Homologs : HomoloGeneC10orf131
Homology/Alignments : Family Browser (UCSC)C10orf131
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerC10orf131 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)C10orf131
dbVarC10orf131
ClinVarC10orf131
1000_GenomesC10orf131 
Exome Variant ServerC10orf131
ExAC (Exome Aggregation Consortium)C10orf131 (select the gene name)
Genetic variants : HAPMAP100127889
Genomic Variants (DGV)C10orf131 [DGVbeta]
DECIPHER (Syndromes)10:97667722-97698415  ENSG00000173088
CONAN: Copy Number AnalysisC10orf131 
Mutations
ICGC Data PortalC10orf131 
TCGA Data PortalC10orf131 
Broad Tumor PortalC10orf131
OASIS PortalC10orf131 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICC10orf131  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDC10orf131
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch C10orf131
DgiDB (Drug Gene Interaction Database)C10orf131
DoCM (Curated mutations)C10orf131 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)C10orf131 (select a term)
intoGenC10orf131
Cancer3DC10orf131(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenC10orf131
Genetic Testing Registry C10orf131
NextProtA6NCD4 [Medical]
TSGene100127889
GENETestsC10orf131
Huge Navigator C10orf131 [HugePedia]
snp3D : Map Gene to Disease100127889
BioCentury BCIQC10orf131
ClinGenC10orf131
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100127889
Chemical/Pharm GKB GenePA134931868
Clinical trialC10orf131
Miscellaneous
canSAR (ICR)C10orf131 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineC10orf131
EVEXC10orf131
GoPubMedC10orf131
iHOPC10orf131
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 11:56:13 CET 2017

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