Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

C10orf142 (chromosome 10 open reading frame 142)

Identity

Other alias-
HGNC (Hugo) C10orf142
LocusID (NCBI) 100130539
Atlas_Id 76586
Location 10q11.21  [Link to chromosome band 10q11]
Location_base_pair Starts at 44788198 and ends at 44790097 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)C10orf142   51236
Cards
Entrez_Gene (NCBI)C10orf142  100130539  chromosome 10 open reading frame 142
Aliases
GeneCards (Weizmann)C10orf142
Ensembl hg19 (Hinxton)ENSG00000277288 [Gene_View]  chr10:44788198-44790097 [Contig_View]  C10orf142 [Vega]
Ensembl hg38 (Hinxton)ENSG00000277288 [Gene_View]  chr10:44788198-44790097 [Contig_View]  C10orf142 [Vega]
ICGC DataPortalENSG00000277288
TCGA cBioPortalC10orf142
AceView (NCBI)C10orf142
Genatlas (Paris)C10orf142
WikiGenes100130539
SOURCE (Princeton)C10orf142
Genetics Home Reference (NIH)C10orf142
Genomic and cartography
GoldenPath hg19 (UCSC)C10orf142  -     chr10:44788198-44790097 +  10q11.21   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)C10orf142  -     10q11.21   [Description]    (hg38-Dec_2013)
EnsemblC10orf142 - 10q11.21 [CytoView hg19]  C10orf142 - 10q11.21 [CytoView hg38]
Mapping of homologs : NCBIC10orf142 [Mapview hg19]  C10orf142 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK295550 LN608341 LN608342
RefSeq transcript (Entrez)NM_001258000
RefSeq genomic (Entrez)NC_000010 NC_018921 NT_030059 NW_004929371
Consensus coding sequences : CCDS (NCBI)C10orf142
Cluster EST : UnigeneHs.694626 [ NCBI ]
CGAP (NCI)Hs.694626
Alternative Splicing GalleryENSG00000277288
Gene ExpressionC10orf142 [ NCBI-GEO ]   C10orf142 [ EBI - ARRAY_EXPRESS ]   C10orf142 [ SEEK ]   C10orf142 [ MEM ]
Gene Expression Viewer (FireBrowse)C10orf142 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100130539
GTEX Portal (Tissue expression)C10orf142
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)C10orf142
DMDM Disease mutations100130539
Blocks (Seattle)C10orf142
Human Protein AtlasENSG00000277288
IPIIPI00922685   
Protein Interaction databases
FunCoupENSG00000277288
BioGRIDC10orf142
STRING (EMBL)C10orf142
ZODIACC10orf142
Ontologies - Pathways
Huge Navigator C10orf142 [HugePedia]
snp3D : Map Gene to Disease100130539
BioCentury BCIQC10orf142
ClinGenC10orf142
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100130539
Clinical trialC10orf142
Miscellaneous
canSAR (ICR)C10orf142 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineC10orf142
EVEXC10orf142
GoPubMedC10orf142
iHOPC10orf142
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 11:56:13 CET 2017

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.