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C10orf143 (chromosome 10 open reading frame 143)

Identity

Alias (NCBI)LINC00959
HGNC (Hugo) C10orf143
HGNC Previous nameLINC00959
HGNC Previous namelong intergenic non-protein coding RNA 959
LocusID (NCBI) 387723
Atlas_Id 79028
Location 10q26.3  [Link to chromosome band 10q26]
Location_base_pair Starts at 130063898 and ends at 130110830 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

Nomenclature
HGNC (Hugo)C10orf143   48677
Cards
Entrez_Gene (NCBI)C10orf143    chromosome 10 open reading frame 143
AliasesLINC00959
GeneCards (Weizmann)C10orf143
Ensembl hg19 (Hinxton)ENSG00000237489 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000237489 [Gene_View]  ENSG00000237489 [Sequence]  chr10:130063898-130110830 [Contig_View]  C10orf143 [Vega]
ICGC DataPortalENSG00000237489
TCGA cBioPortalC10orf143
AceView (NCBI)C10orf143
Genatlas (Paris)C10orf143
SOURCE (Princeton)C10orf143
Genetics Home Reference (NIH)C10orf143
Genomic and cartography
GoldenPath hg38 (UCSC)C10orf143  -     chr10:130063898-130110830 -  10q26.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)C10orf143  -     10q26.3   [Description]    (hg19-Feb_2009)
GoldenPathC10orf143 - 10q26.3 [CytoView hg19]  C10orf143 - 10q26.3 [CytoView hg38]
ImmunoBaseENSG00000237489
Genome Data Viewer NCBIC10orf143 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AK094118 AW135007 EU250747
RefSeq transcript (Entrez)NM_001355042
Consensus coding sequences : CCDS (NCBI)C10orf143
Gene ExpressionC10orf143 [ NCBI-GEO ]   C10orf143 [ EBI - ARRAY_EXPRESS ]   C10orf143 [ SEEK ]   C10orf143 [ MEM ]
Gene Expression Viewer (FireBrowse)C10orf143 [ Firebrowse - Broad ]
GenevisibleExpression of C10orf143 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)387723
GTEX Portal (Tissue expression)C10orf143
Human Protein AtlasENSG00000237489-C10orf143 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)C10orf143
Human Protein Atlas [tissue]ENSG00000237489-C10orf143 [tissue]
Protein Interaction databases
BioGRIDC10orf143
STRING (EMBL)C10orf143
ZODIACC10orf143
Ontologies - Pathways
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXC10orf143
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 15:43:40 CEST 2021

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