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C10orf71-AS1 (C10orf71 antisense RNA 1)

Identity

Other alias-
HGNC (Hugo) C10orf71-AS1
LocusID (NCBI) 100506769
Atlas_Id 60869
Location 10q11.23  [Link to chromosome band 10q11]
Location_base_pair Starts at 49296283 and ends at 49298893 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)C10orf71-AS1   45007
Cards
Entrez_Gene (NCBI)C10orf71-AS1  100506769  C10orf71 antisense RNA 1
Aliases
GeneCards (Weizmann)C10orf71-AS1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr10:49296283-49298893 [Contig_View]  C10orf71-AS1 [Vega]
TCGA cBioPortalC10orf71-AS1
AceView (NCBI)C10orf71-AS1
Genatlas (Paris)C10orf71-AS1
WikiGenes100506769
SOURCE (Princeton)C10orf71-AS1
Genetics Home Reference (NIH)C10orf71-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)C10orf71-AS1  -     chr10:49296283-49298893 -  10q11.23   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)C10orf71-AS1  -     10q11.23   [Description]    (hg19-Feb_2009)
EnsemblC10orf71-AS1 - 10q11.23 [CytoView hg19]  C10orf71-AS1 - 10q11.23 [CytoView hg38]
Mapping of homologs : NCBIC10orf71-AS1 [Mapview hg19]  C10orf71-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)DA762755 DA764276
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)C10orf71-AS1
Cluster EST : UnigeneHs.562293 [ NCBI ]
CGAP (NCI)Hs.562293
Gene ExpressionC10orf71-AS1 [ NCBI-GEO ]   C10orf71-AS1 [ EBI - ARRAY_EXPRESS ]   C10orf71-AS1 [ SEEK ]   C10orf71-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)C10orf71-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100506769
GTEX Portal (Tissue expression)C10orf71-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)C10orf71-AS1
DMDM Disease mutations100506769
Blocks (Seattle)C10orf71-AS1
Protein Interaction databases
BioGRIDC10orf71-AS1
STRING (EMBL)C10orf71-AS1
ZODIACC10orf71-AS1
Ontologies - Pathways
Huge Navigator C10orf71-AS1 [HugePedia]
snp3D : Map Gene to Disease100506769
BioCentury BCIQC10orf71-AS1
ClinGenC10orf71-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100506769
Clinical trialC10orf71-AS1
Miscellaneous
canSAR (ICR)C10orf71-AS1 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineC10orf71-AS1
EVEXC10orf71-AS1
GoPubMedC10orf71-AS1
iHOPC10orf71-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:21:17 CET 2017

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