C10orf90 (chromosome 10 open reading frame 90)

2012-05-01  

Identity

HGNC
C10orf90
LOCATION
10q26.2
LOCUSID
118611
ALIAS
FATS,bA422P15.2
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 118611
MIM: 617735
HGNC: 26563
Ensembl: ENSG00000154493

Variants:

dbSNP: 118611
ClinVar: 118611
TCGA: ENSG00000154493
COSMIC: C10orf90

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000154493ENST00000284694Q96M02
ENSG00000154493ENST00000356858Q5T025
ENSG00000154493ENST00000424927H7C3F8
ENSG00000154493ENST00000432642A0A0A0MSX2
ENSG00000154493ENST00000463082S4R3Q7
ENSG00000154493ENST00000480379A0A0C4DGS3
ENSG00000154493ENST00000488181S4R3N7

Expression (GTEx)

0
5
10
15
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
317708492019[Expression of FATS in non-small cell lung cancer and its relationship with prognosis].2
317708492019[Expression of FATS in non-small cell lung cancer and its relationship with prognosis].2
284022752017The value of FATS expression in predicting sensitivity to radiotherapy in breast cancer.2
284022752017The value of FATS expression in predicting sensitivity to radiotherapy in breast cancer.2
262233542015A functional genetic variant in fragile-site gene FATS modulates the risk of breast cancer in triparous women.4
262233542015A functional genetic variant in fragile-site gene FATS modulates the risk of breast cancer in triparous women.4
242406852014FATS is an E2-independent ubiquitin ligase that stabilizes p53 and promotes its activation in response to DNA damage.14
242406852014FATS is an E2-independent ubiquitin ligase that stabilizes p53 and promotes its activation in response to DNA damage.14
220404992011Expression level of novel tumor suppressor gene FATS is associated with the outcome of node positive breast cancer.4
220404992011Expression level of novel tumor suppressor gene FATS is associated with the outcome of node positive breast cancer.4
208440832010Centriolar association of ALMS1 and likely centrosomal functions of the ALMS motif-containing proteins C10orf90 and KIAA1731.64
208440832010Centriolar association of ALMS1 and likely centrosomal functions of the ALMS motif-containing proteins C10orf90 and KIAA1731.64

Citation

Dessen P

C10orf90 (chromosome 10 open reading frame 90)

Atlas Genet Cytogenet Oncol Haematol. 2012-05-01

Online version: http://atlasgeneticsoncology.org/gene/52693/c10orf90