Atlas of Genetics and Cytogenetics in Oncology and Haematology


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C11orf65 (chromosome 11 open reading frame 65)

Identity

Alias (NCBI)MFI
HGNC (Hugo) C11orf65
HGNC Alias symbMGC33948
LocusID (NCBI) 160140
Atlas_Id 60892
Location 11q22.3  [Link to chromosome band 11q22]
Location_base_pair Starts at 108382755 and ends at 108467529 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
PIBF1 (13q22.1) / C11orf65 (11q22.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)C11orf65   28519
Cards
Entrez_Gene (NCBI)C11orf65    chromosome 11 open reading frame 65
AliasesMFI
GeneCards (Weizmann)C11orf65
Ensembl hg19 (Hinxton)ENSG00000166323 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000166323 [Gene_View]  ENSG00000166323 [Sequence]  chr11:108382755-108467529 [Contig_View]  C11orf65 [Vega]
ICGC DataPortalENSG00000166323
TCGA cBioPortalC11orf65
AceView (NCBI)C11orf65
Genatlas (Paris)C11orf65
SOURCE (Princeton)C11orf65
Genetics Home Reference (NIH)C11orf65
Genomic and cartography
GoldenPath hg38 (UCSC)C11orf65  -     chr11:108382755-108467529 -  11q22.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)C11orf65  -     11q22.3   [Description]    (hg19-Feb_2009)
GoldenPathC11orf65 - 11q22.3 [CytoView hg19]  C11orf65 - 11q22.3 [CytoView hg38]
ImmunoBaseENSG00000166323
Genome Data Viewer NCBIC11orf65 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AK303096 BC029536 BC059411 DB104722
RefSeq transcript (Entrez)NM_001330368 NM_001351110 NM_152587
Consensus coding sequences : CCDS (NCBI)C11orf65
Gene ExpressionC11orf65 [ NCBI-GEO ]   C11orf65 [ EBI - ARRAY_EXPRESS ]   C11orf65 [ SEEK ]   C11orf65 [ MEM ]
Gene Expression Viewer (FireBrowse)C11orf65 [ Firebrowse - Broad ]
GenevisibleExpression of C11orf65 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)160140
GTEX Portal (Tissue expression)C11orf65
Human Protein AtlasENSG00000166323-C11orf65 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NCR3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NCR3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NCR3
PhosPhoSitePlusQ8NCR3
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)C11orf65
SuperfamilyQ8NCR3
AlphaFold pdb e-kbQ8NCR3   
Human Protein Atlas [tissue]ENSG00000166323-C11orf65 [tissue]
HPRD14579
Protein Interaction databases
DIP (DOE-UCLA)Q8NCR3
IntAct (EBI)Q8NCR3
BioGRIDC11orf65
STRING (EMBL)C11orf65
ZODIACC11orf65
Ontologies - Pathways
QuickGOQ8NCR3
Ontology : AmiGOprotein binding  mitochondrial outer membrane  cytosol  negative regulation of mitochondrial fission  negative regulation of protein targeting to mitochondrion  
Ontology : EGO-EBIprotein binding  mitochondrial outer membrane  cytosol  negative regulation of mitochondrial fission  negative regulation of protein targeting to mitochondrion  
NDEx NetworkC11orf65
Atlas of Cancer Signalling NetworkC11orf65
Wikipedia pathwaysC11orf65
Orthology - Evolution
OrthoDB160140
GeneTree (enSembl)ENSG00000166323
Phylogenetic Trees/Animal Genes : TreeFamC11orf65
Homologs : HomoloGeneC11orf65
Homology/Alignments : Family Browser (UCSC)C11orf65
Gene fusions - Rearrangements
Fusion : QuiverC11orf65
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerC11orf65 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)C11orf65
dbVarC11orf65
ClinVarC11orf65
MonarchC11orf65
1000_GenomesC11orf65 
Exome Variant ServerC11orf65
GNOMAD BrowserENSG00000166323
Varsome BrowserC11orf65
ACMGC11orf65 variants
VarityQ8NCR3
Genomic Variants (DGV)C11orf65 [DGVbeta]
DECIPHERC11orf65 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisC11orf65 
Mutations
ICGC Data PortalC11orf65 
TCGA Data PortalC11orf65 
Broad Tumor PortalC11orf65
OASIS PortalC11orf65 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICC11orf65  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DC11orf65
Mutations and Diseases : HGMDC11orf65
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaC11orf65
DgiDB (Drug Gene Interaction Database)C11orf65
DoCM (Curated mutations)C11orf65
CIViC (Clinical Interpretations of Variants in Cancer)C11orf65
Cancer3DC11orf65
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETC11orf65
MedgenC11orf65
Genetic Testing Registry C11orf65
NextProtQ8NCR3 [Medical]
GENETestsC11orf65
Target ValidationC11orf65
Huge Navigator C11orf65 [HugePedia]
ClinGenC11orf65
Clinical trials, drugs, therapy
MyCancerGenomeC11orf65
Protein Interactions : CTDC11orf65
Pharm GKB GenePA144596484
PharosQ8NCR3
Clinical trialC11orf65
Miscellaneous
canSAR (ICR)C11orf65
HarmonizomeC11orf65
DataMed IndexC11orf65
Probes
Litterature
PubMed16 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXC11orf65
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 15:43:45 CEST 2021

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