C11orf80 (chromosome 11 open reading frame 80)

2014-11-01  

Identity

HGNC
C11orf80
LOCATION
11q13.2
LOCUSID
79703
ALIAS
HYDM4,TOP6BL,TOPOVIBL
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 79703
MIM: 616109
HGNC: 26197
Ensembl: ENSG00000173715

Variants:

dbSNP: 79703
ClinVar: 79703
TCGA: ENSG00000173715
COSMIC: C11orf80

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000173715ENST00000360962Q8N6T0
ENSG00000173715ENST00000524551E9PMI8
ENSG00000173715ENST00000525449A0A140TA08
ENSG00000173715ENST00000525908A0A2U3TZP7
ENSG00000173715ENST00000526260H0YD22
ENSG00000173715ENST00000527634E9PKM2
ENSG00000173715ENST00000531400E9PNG9
ENSG00000173715ENST00000531415H0YD55
ENSG00000173715ENST00000532089H0YDL3
ENSG00000173715ENST00000532565H0YE21
ENSG00000173715ENST00000532727E9PJS1
ENSG00000173715ENST00000534325E9PMU2
ENSG00000173715ENST00000540737B4DXL1
ENSG00000173715ENST00000642265A0A2R8Y5A2

Expression (GTEx)

0
5
10
15
20
25
30
35
40
45
50
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
275296782016Leveraging electronic health records to study pleiotropic effects on bipolar disorder and medical comorbidities.2

Citation

Dessen P

C11orf80 (chromosome 11 open reading frame 80)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/60897/c11orf80