Atlas of Genetics and Cytogenetics in Oncology and Haematology


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C11orf91 (chromosome 11 open reading frame 91)

Identity

Other alias-
HGNC (Hugo) C11orf91
LocusID (NCBI) 100131378
Atlas_Id 60903
Location 11p13  [Link to chromosome band 11p13]
Location_base_pair Starts at 33698108 and ends at 33700740 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)C11orf91   34444
Cards
Entrez_Gene (NCBI)C11orf91  100131378  chromosome 11 open reading frame 91
Aliases
GeneCards (Weizmann)C11orf91
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr11:33698108-33700740 [Contig_View]  C11orf91 [Vega]
TCGA cBioPortalC11orf91
AceView (NCBI)C11orf91
Genatlas (Paris)C11orf91
WikiGenes100131378
SOURCE (Princeton)C11orf91
Genetics Home Reference (NIH)C11orf91
Genomic and cartography
GoldenPath hg38 (UCSC)C11orf91  -     chr11:33698108-33700740 -  11p13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)C11orf91  -     11p13   [Description]    (hg19-Feb_2009)
EnsemblC11orf91 - 11p13 [CytoView hg19]  C11orf91 - 11p13 [CytoView hg38]
Mapping of homologs : NCBIC11orf91 [Mapview hg19]  C11orf91 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AB231759 AB231760
RefSeq transcript (Entrez)NM_001166692
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)C11orf91
Cluster EST : UnigeneHs.709466 [ NCBI ]
CGAP (NCI)Hs.709466
Gene ExpressionC11orf91 [ NCBI-GEO ]   C11orf91 [ EBI - ARRAY_EXPRESS ]   C11orf91 [ SEEK ]   C11orf91 [ MEM ]
Gene Expression Viewer (FireBrowse)C11orf91 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100131378
GTEX Portal (Tissue expression)C11orf91
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ3C1V1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ3C1V1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ3C1V1
Splice isoforms : SwissVarQ3C1V1
PhosPhoSitePlusQ3C1V1
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)C11orf91
DMDM Disease mutations100131378
Blocks (Seattle)C11orf91
SuperfamilyQ3C1V1
Peptide AtlasQ3C1V1
IPIIPI00738804   IPI00895910   
Protein Interaction databases
DIP (DOE-UCLA)Q3C1V1
IntAct (EBI)Q3C1V1
BioGRIDC11orf91
STRING (EMBL)C11orf91
ZODIACC11orf91
Ontologies - Pathways
QuickGOQ3C1V1
Ontology : AmiGOintracellular membrane-bounded organelle  
Ontology : EGO-EBIintracellular membrane-bounded organelle  
NDEx NetworkC11orf91
Atlas of Cancer Signalling NetworkC11orf91
Wikipedia pathwaysC11orf91
Orthology - Evolution
OrthoDB100131378
Phylogenetic Trees/Animal Genes : TreeFamC11orf91
HOVERGENQ3C1V1
HOGENOMQ3C1V1
Homologs : HomoloGeneC11orf91
Homology/Alignments : Family Browser (UCSC)C11orf91
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerC11orf91 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)C11orf91
dbVarC11orf91
ClinVarC11orf91
1000_GenomesC11orf91 
Exome Variant ServerC11orf91
ExAC (Exome Aggregation Consortium)C11orf91 (select the gene name)
Genetic variants : HAPMAP100131378
Genomic Variants (DGV)C11orf91 [DGVbeta]
DECIPHERC11orf91 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisC11orf91 
Mutations
ICGC Data PortalC11orf91 
TCGA Data PortalC11orf91 
Broad Tumor PortalC11orf91
OASIS PortalC11orf91 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICC11orf91  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDC11orf91
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch C11orf91
DgiDB (Drug Gene Interaction Database)C11orf91
DoCM (Curated mutations)C11orf91 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)C11orf91 (select a term)
intoGenC11orf91
Cancer3DC11orf91(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenC11orf91
Genetic Testing Registry C11orf91
NextProtQ3C1V1 [Medical]
TSGene100131378
GENETestsC11orf91
Target ValidationC11orf91
Huge Navigator C11orf91 [HugePedia]
snp3D : Map Gene to Disease100131378
BioCentury BCIQC11orf91
ClinGenC11orf91
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100131378
Chemical/Pharm GKB GenePA164716759
Clinical trialC11orf91
Miscellaneous
canSAR (ICR)C11orf91 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineC11orf91
EVEXC11orf91
GoPubMedC11orf91
iHOPC11orf91
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:02:41 CEST 2017

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