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C11orf97 (chromosome 11 open reading frame 97)

Identity

Alias (NCBI)LINC01171
HGNC (Hugo) C11orf97
HGNC Previous nameLINC01171
HGNC Previous namelong intergenic non-protein coding RNA 1171
LocusID (NCBI) 643037
Atlas_Id 60906
Location 11q21  [Link to chromosome band 11q21]
Location_base_pair Starts at 94512461 and ends at 94532123 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)C11orf97   49544
Cards
Entrez_Gene (NCBI)C11orf97    chromosome 11 open reading frame 97
AliasesLINC01171
GeneCards (Weizmann)C11orf97
Ensembl hg19 (Hinxton)ENSG00000257057 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000257057 [Gene_View]  ENSG00000257057 [Sequence]  chr11:94512461-94532123 [Contig_View]  C11orf97 [Vega]
ICGC DataPortalENSG00000257057
TCGA cBioPortalC11orf97
AceView (NCBI)C11orf97
Genatlas (Paris)C11orf97
SOURCE (Princeton)C11orf97
Genetics Home Reference (NIH)C11orf97
Genomic and cartography
GoldenPath hg38 (UCSC)C11orf97  -     chr11:94512461-94532123 +  11q21   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)C11orf97  -     11q21   [Description]    (hg19-Feb_2009)
GoldenPathC11orf97 - 11q21 [CytoView hg19]  C11orf97 - 11q21 [CytoView hg38]
ImmunoBaseENSG00000257057
Genome Data Viewer NCBIC11orf97 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_001190462
Consensus coding sequences : CCDS (NCBI)C11orf97
Gene ExpressionC11orf97 [ NCBI-GEO ]   C11orf97 [ EBI - ARRAY_EXPRESS ]   C11orf97 [ SEEK ]   C11orf97 [ MEM ]
Gene Expression Viewer (FireBrowse)C11orf97 [ Firebrowse - Broad ]
GenevisibleExpression of C11orf97 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)643037
GTEX Portal (Tissue expression)C11orf97
Human Protein AtlasENSG00000257057-C11orf97 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)C11orf97
Human Protein Atlas [tissue]ENSG00000257057-C11orf97 [tissue]
Protein Interaction databases
BioGRIDC11orf97
STRING (EMBL)C11orf97
ZODIACC11orf97
Ontologies - Pathways
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXC11orf97
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 15:43:46 CEST 2021

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