Atlas of Genetics and Cytogenetics in Oncology and Haematology

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C11orf97 (chromosome 11 open reading frame 97)


Alias (NCBI)LINC01171
HGNC (Hugo) C11orf97
HGNC Previous nameLINC01171
HGNC Previous namelong intergenic non-protein coding RNA 1171
LocusID (NCBI) 643037
Atlas_Id 60906
Location 11q21  [Link to chromosome band 11q21]
Location_base_pair Starts at 94512461 and ends at 94532123 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)


Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

HGNC (Hugo)C11orf97   49544
Entrez_Gene (NCBI)C11orf97    chromosome 11 open reading frame 97
GeneCards (Weizmann)C11orf97
Ensembl hg19 (Hinxton)ENSG00000257057 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000257057 [Gene_View]  ENSG00000257057 [Sequence]  chr11:94512461-94532123 [Contig_View]  C11orf97 [Vega]
ICGC DataPortalENSG00000257057
TCGA cBioPortalC11orf97
AceView (NCBI)C11orf97
Genatlas (Paris)C11orf97
SOURCE (Princeton)C11orf97
Genetics Home Reference (NIH)C11orf97
Genomic and cartography
GoldenPath hg38 (UCSC)C11orf97  -     chr11:94512461-94532123 +  11q21   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)C11orf97  -     11q21   [Description]    (hg19-Feb_2009)
GoldenPathC11orf97 - 11q21 [CytoView hg19]  C11orf97 - 11q21 [CytoView hg38]
Genome Data Viewer NCBIC11orf97 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_001190462
Consensus coding sequences : CCDS (NCBI)C11orf97
Gene ExpressionC11orf97 [ NCBI-GEO ]   C11orf97 [ EBI - ARRAY_EXPRESS ]   C11orf97 [ SEEK ]   C11orf97 [ MEM ]
Gene Expression Viewer (FireBrowse)C11orf97 [ Firebrowse - Broad ]
GenevisibleExpression of C11orf97 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)643037
GTEX Portal (Tissue expression)C11orf97
Human Protein AtlasENSG00000257057-C11orf97 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)C11orf97
Human Protein Atlas [tissue]ENSG00000257057-C11orf97 [tissue]
Protein Interaction databases
Ontologies - Pathways
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 15:43:46 CEST 2021

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