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C14orf1 (chromosome 14 open reading frame 1)

Identity

Alias_symbol (synonym)NET51
ERG28
Other alias
HGNC (Hugo) C14orf1
LocusID (NCBI) 11161
Atlas_Id 52730
Location 14q24.3  [Link to chromosome band 14q24]
Location_base_pair Starts at 75650890 and ends at 75661195 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
C14orf1 (14q24.3) / TRIP12 (2q36.3)WDR76 (15q15.3) / C14orf1 (14q24.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)C14orf1   1187
Cards
Entrez_Gene (NCBI)C14orf1  11161  chromosome 14 open reading frame 1
AliasesERG28; NET51
GeneCards (Weizmann)C14orf1
Ensembl hg19 (Hinxton)ENSG00000133935 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000133935 [Gene_View]  chr14:75650890-75661195 [Contig_View]  C14orf1 [Vega]
ICGC DataPortalENSG00000133935
TCGA cBioPortalC14orf1
AceView (NCBI)C14orf1
Genatlas (Paris)C14orf1
WikiGenes11161
SOURCE (Princeton)C14orf1
Genetics Home Reference (NIH)C14orf1
Genomic and cartography
GoldenPath hg38 (UCSC)C14orf1  -     chr14:75650890-75661195 -  14q24.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)C14orf1  -     14q24.3   [Description]    (hg19-Feb_2009)
EnsemblC14orf1 - 14q24.3 [CytoView hg19]  C14orf1 - 14q24.3 [CytoView hg38]
Mapping of homologs : NCBIC14orf1 [Mapview hg19]  C14orf1 [Mapview hg38]
OMIM604576   
Gene and transcription
Genbank (Entrez)AA709128 AF134159 AF136971 AF161406 AK311764
RefSeq transcript (Entrez)NM_007176
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)C14orf1
Cluster EST : UnigeneHs.15106 [ NCBI ]
CGAP (NCI)Hs.15106
Alternative Splicing GalleryENSG00000133935
Gene ExpressionC14orf1 [ NCBI-GEO ]   C14orf1 [ EBI - ARRAY_EXPRESS ]   C14orf1 [ SEEK ]   C14orf1 [ MEM ]
Gene Expression Viewer (FireBrowse)C14orf1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)11161
GTEX Portal (Tissue expression)C14orf1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9UKR5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9UKR5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9UKR5
Splice isoforms : SwissVarQ9UKR5
PhosPhoSitePlusQ9UKR5
Domains : Interpro (EBI)Erg28   
Domain families : Pfam (Sanger)Erg28 (PF03694)   
Domain families : Pfam (NCBI)pfam03694   
Conserved Domain (NCBI)C14orf1
DMDM Disease mutations11161
Blocks (Seattle)C14orf1
SuperfamilyQ9UKR5
Human Protein AtlasENSG00000133935
Peptide AtlasQ9UKR5
HPRD05201
IPIIPI00007730   
Protein Interaction databases
DIP (DOE-UCLA)Q9UKR5
IntAct (EBI)Q9UKR5
FunCoupENSG00000133935
BioGRIDC14orf1
STRING (EMBL)C14orf1
ZODIACC14orf1
Ontologies - Pathways
QuickGOQ9UKR5
Ontology : AmiGOmolecular_function  endoplasmic reticulum membrane  ergosterol biosynthetic process  biological_process  integral component of membrane  transport vesicle  protein binding, bridging  
Ontology : EGO-EBImolecular_function  endoplasmic reticulum membrane  ergosterol biosynthetic process  biological_process  integral component of membrane  transport vesicle  protein binding, bridging  
NDEx NetworkC14orf1
Atlas of Cancer Signalling NetworkC14orf1
Wikipedia pathwaysC14orf1
Orthology - Evolution
OrthoDB11161
GeneTree (enSembl)ENSG00000133935
Phylogenetic Trees/Animal Genes : TreeFamC14orf1
HOVERGENQ9UKR5
HOGENOMQ9UKR5
Homologs : HomoloGeneC14orf1
Homology/Alignments : Family Browser (UCSC)C14orf1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerC14orf1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)C14orf1
dbVarC14orf1
ClinVarC14orf1
1000_GenomesC14orf1 
Exome Variant ServerC14orf1
ExAC (Exome Aggregation Consortium)C14orf1 (select the gene name)
Genetic variants : HAPMAP11161
Genomic Variants (DGV)C14orf1 [DGVbeta]
DECIPHERC14orf1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisC14orf1 
Mutations
ICGC Data PortalC14orf1 
TCGA Data PortalC14orf1 
Broad Tumor PortalC14orf1
OASIS PortalC14orf1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICC14orf1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDC14orf1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch C14orf1
DgiDB (Drug Gene Interaction Database)C14orf1
DoCM (Curated mutations)C14orf1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)C14orf1 (select a term)
intoGenC14orf1
Cancer3DC14orf1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM604576   
Orphanet
MedgenC14orf1
Genetic Testing Registry C14orf1
NextProtQ9UKR5 [Medical]
TSGene11161
GENETestsC14orf1
Target ValidationC14orf1
Huge Navigator C14orf1 [HugePedia]
snp3D : Map Gene to Disease11161
BioCentury BCIQC14orf1
ClinGenC14orf1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD11161
Chemical/Pharm GKB GenePA25513
Clinical trialC14orf1
Miscellaneous
canSAR (ICR)C14orf1 (select the gene name)
Probes
Litterature
PubMed23 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineC14orf1
EVEXC14orf1
GoPubMedC14orf1
iHOPC14orf1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 12:26:00 CEST 2017

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