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C14orf142 (chromosome 14 open reading frame 142)

Identity

Other aliasPNAS-127
HGNC (Hugo) C14orf142
LocusID (NCBI) 84520
Atlas_Id 60930
Location 14q32.12  [Link to chromosome band 14q32]
Location_base_pair Starts at 93669237 and ends at 93673459 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)C14orf142   20356
Cards
Entrez_Gene (NCBI)C14orf142  84520  chromosome 14 open reading frame 142
AliasesPNAS-127
GeneCards (Weizmann)C14orf142
Ensembl hg19 (Hinxton)ENSG00000170270 [Gene_View]  chr14:93669237-93673459 [Contig_View]  C14orf142 [Vega]
Ensembl hg38 (Hinxton)ENSG00000170270 [Gene_View]  chr14:93669237-93673459 [Contig_View]  C14orf142 [Vega]
ICGC DataPortalENSG00000170270
TCGA cBioPortalC14orf142
AceView (NCBI)C14orf142
Genatlas (Paris)C14orf142
WikiGenes84520
SOURCE (Princeton)C14orf142
Genetics Home Reference (NIH)C14orf142
Genomic and cartography
GoldenPath hg19 (UCSC)C14orf142  -     chr14:93669237-93673459 -  14q32.12   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)C14orf142  -     14q32.12   [Description]    (hg38-Dec_2013)
EnsemblC14orf142 - 14q32.12 [CytoView hg19]  C14orf142 - 14q32.12 [CytoView hg38]
Mapping of homologs : NCBIC14orf142 [Mapview hg19]  C14orf142 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF277185 BC021733 BC065216 BC107429 BC109390
RefSeq transcript (Entrez)NM_032490
RefSeq genomic (Entrez)NC_000014 NC_018925 NT_026437 NT_187601 NW_004929393
Consensus coding sequences : CCDS (NCBI)C14orf142
Cluster EST : UnigeneHs.20142 [ NCBI ]
CGAP (NCI)Hs.20142
Alternative Splicing GalleryENSG00000170270
Gene ExpressionC14orf142 [ NCBI-GEO ]   C14orf142 [ EBI - ARRAY_EXPRESS ]   C14orf142 [ SEEK ]   C14orf142 [ MEM ]
Gene Expression Viewer (FireBrowse)C14orf142 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)84520
GTEX Portal (Tissue expression)C14orf142
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9BXV9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9BXV9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9BXV9
Splice isoforms : SwissVarQ9BXV9
PhosPhoSitePlusQ9BXV9
Domains : Interpro (EBI)DUF4611   
Domain families : Pfam (Sanger)DUF4611 (PF15387)   
Domain families : Pfam (NCBI)pfam15387   
Conserved Domain (NCBI)C14orf142
DMDM Disease mutations84520
Blocks (Seattle)C14orf142
SuperfamilyQ9BXV9
Human Protein AtlasENSG00000170270
Peptide AtlasQ9BXV9
HPRD16608
IPIIPI00032506   IPI01025377   IPI00914674   
Protein Interaction databases
DIP (DOE-UCLA)Q9BXV9
IntAct (EBI)Q9BXV9
FunCoupENSG00000170270
BioGRIDC14orf142
STRING (EMBL)C14orf142
ZODIACC14orf142
Ontologies - Pathways
QuickGOQ9BXV9
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkC14orf142
Atlas of Cancer Signalling NetworkC14orf142
Wikipedia pathwaysC14orf142
Orthology - Evolution
OrthoDB84520
GeneTree (enSembl)ENSG00000170270
Phylogenetic Trees/Animal Genes : TreeFamC14orf142
HOVERGENQ9BXV9
HOGENOMQ9BXV9
Homologs : HomoloGeneC14orf142
Homology/Alignments : Family Browser (UCSC)C14orf142
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerC14orf142 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)C14orf142
dbVarC14orf142
ClinVarC14orf142
1000_GenomesC14orf142 
Exome Variant ServerC14orf142
ExAC (Exome Aggregation Consortium)C14orf142 (select the gene name)
Genetic variants : HAPMAP84520
Genomic Variants (DGV)C14orf142 [DGVbeta]
DECIPHER (Syndromes)14:93669237-93673459  ENSG00000170270
CONAN: Copy Number AnalysisC14orf142 
Mutations
ICGC Data PortalC14orf142 
TCGA Data PortalC14orf142 
Broad Tumor PortalC14orf142
OASIS PortalC14orf142 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICC14orf142  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDC14orf142
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch C14orf142
DgiDB (Drug Gene Interaction Database)C14orf142
DoCM (Curated mutations)C14orf142 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)C14orf142 (select a term)
intoGenC14orf142
Cancer3DC14orf142(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenC14orf142
Genetic Testing Registry C14orf142
NextProtQ9BXV9 [Medical]
TSGene84520
GENETestsC14orf142
Huge Navigator C14orf142 [HugePedia]
snp3D : Map Gene to Disease84520
BioCentury BCIQC14orf142
ClinGenC14orf142
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD84520
Chemical/Pharm GKB GenePA134918457
Clinical trialC14orf142
Miscellaneous
canSAR (ICR)C14orf142 (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineC14orf142
EVEXC14orf142
GoPubMedC14orf142
iHOPC14orf142
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 11:56:28 CET 2017

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