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C14orf159 (chromosome 14 open reading frame 159)

Identity

Alias_symbol (synonym)FLJ39975
Other alias-
HGNC (Hugo) C14orf159
LocusID (NCBI) 80017
Atlas_Id 60932
Location 14q32.11  [Link to chromosome band 14q32]
Location_base_pair Starts at 91114013 and ends at 91225396 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
PIGF (2p21) / C14orf159 (14q32.11)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)C14orf159   20498
Cards
Entrez_Gene (NCBI)C14orf159  80017  chromosome 14 open reading frame 159
Aliases
GeneCards (Weizmann)C14orf159
Ensembl hg19 (Hinxton)ENSG00000133943 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000133943 [Gene_View]  chr14:91114013-91225396 [Contig_View]  C14orf159 [Vega]
ICGC DataPortalENSG00000133943
TCGA cBioPortalC14orf159
AceView (NCBI)C14orf159
Genatlas (Paris)C14orf159
WikiGenes80017
SOURCE (Princeton)C14orf159
Genetics Home Reference (NIH)C14orf159
Genomic and cartography
GoldenPath hg38 (UCSC)C14orf159  -     chr14:91114013-91225396 +  14q32.11   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)C14orf159  -     14q32.11   [Description]    (hg19-Feb_2009)
EnsemblC14orf159 - 14q32.11 [CytoView hg19]  C14orf159 - 14q32.11 [CytoView hg38]
Mapping of homologs : NCBIC14orf159 [Mapview hg19]  C14orf159 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA192653 AB210031 AI825879 AK022564 AK023200
RefSeq transcript (Entrez)NM_001102366 NM_001102367 NM_001102368 NM_001102369 NM_001286470 NM_001286471 NM_001286472 NM_001286473 NM_024952
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)C14orf159
Cluster EST : UnigeneHs.309849 [ NCBI ]
CGAP (NCI)Hs.309849
Alternative Splicing GalleryENSG00000133943
Gene ExpressionC14orf159 [ NCBI-GEO ]   C14orf159 [ EBI - ARRAY_EXPRESS ]   C14orf159 [ SEEK ]   C14orf159 [ MEM ]
Gene Expression Viewer (FireBrowse)C14orf159 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)80017
GTEX Portal (Tissue expression)C14orf159
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ7Z3D6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ7Z3D6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ7Z3D6
Splice isoforms : SwissVarQ7Z3D6
PhosPhoSitePlusQ7Z3D6
Domains : Interpro (EBI)DUF1445    DUF4392    UPF0317_mt   
Domain families : Pfam (Sanger)DUF1445 (PF07286)    DUF4392 (PF14336)   
Domain families : Pfam (NCBI)pfam07286    pfam14336   
Conserved Domain (NCBI)C14orf159
DMDM Disease mutations80017
Blocks (Seattle)C14orf159
SuperfamilyQ7Z3D6
Human Protein AtlasENSG00000133943
Peptide AtlasQ7Z3D6
HPRD16612
IPIIPI00328650   IPI00411520   IPI00328443   IPI00411522   IPI00411523   IPI00062837   IPI00974149   IPI01010999   IPI00982870   IPI00978888   IPI00977442   IPI00984059   IPI00978685   IPI00978689   IPI00976905   IPI00978280   IPI00974214   IPI00973876   IPI00974048   IPI00983369   IPI00982149   IPI00984742   IPI00984062   IPI00985251   IPI00976531   
Protein Interaction databases
DIP (DOE-UCLA)Q7Z3D6
IntAct (EBI)Q7Z3D6
FunCoupENSG00000133943
BioGRIDC14orf159
STRING (EMBL)C14orf159
ZODIACC14orf159
Ontologies - Pathways
QuickGOQ7Z3D6
Ontology : AmiGOmolecular_function  protein binding  cellular_component  mitochondrion  biological_process  
Ontology : EGO-EBImolecular_function  protein binding  cellular_component  mitochondrion  biological_process  
NDEx NetworkC14orf159
Atlas of Cancer Signalling NetworkC14orf159
Wikipedia pathwaysC14orf159
Orthology - Evolution
OrthoDB80017
GeneTree (enSembl)ENSG00000133943
Phylogenetic Trees/Animal Genes : TreeFamC14orf159
HOVERGENQ7Z3D6
HOGENOMQ7Z3D6
Homologs : HomoloGeneC14orf159
Homology/Alignments : Family Browser (UCSC)C14orf159
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerC14orf159 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)C14orf159
dbVarC14orf159
ClinVarC14orf159
1000_GenomesC14orf159 
Exome Variant ServerC14orf159
ExAC (Exome Aggregation Consortium)C14orf159 (select the gene name)
Genetic variants : HAPMAP80017
Genomic Variants (DGV)C14orf159 [DGVbeta]
DECIPHERC14orf159 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisC14orf159 
Mutations
ICGC Data PortalC14orf159 
TCGA Data PortalC14orf159 
Broad Tumor PortalC14orf159
OASIS PortalC14orf159 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICC14orf159  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDC14orf159
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)MSeqDR-LSDB Mitochondrial Disease Locus Specific Database
BioMutasearch C14orf159
DgiDB (Drug Gene Interaction Database)C14orf159
DoCM (Curated mutations)C14orf159 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)C14orf159 (select a term)
intoGenC14orf159
Cancer3DC14orf159(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenC14orf159
Genetic Testing Registry C14orf159
NextProtQ7Z3D6 [Medical]
TSGene80017
GENETestsC14orf159
Target ValidationC14orf159
Huge Navigator C14orf159 [HugePedia]
snp3D : Map Gene to Disease80017
BioCentury BCIQC14orf159
ClinGenC14orf159
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD80017
Chemical/Pharm GKB GenePA134952868
Clinical trialC14orf159
Miscellaneous
canSAR (ICR)C14orf159 (select the gene name)
Probes
Litterature
PubMed16 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineC14orf159
EVEXC14orf159
GoPubMedC14orf159
iHOPC14orf159
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:02:45 CEST 2017

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