Atlas of Genetics and Cytogenetics in Oncology and Haematology


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C14orf177 (chromosome 14 open reading frame 177)

Identity

Alias_symbol (synonym)FLJ25773
Other alias-
HGNC (Hugo) C14orf177
LocusID (NCBI) 283598
Atlas_Id 60934
Location 14q32.2  [Link to chromosome band 14q32]
Location_base_pair Starts at 99177950 and ends at 99184103 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)C14orf177   26375
Cards
Entrez_Gene (NCBI)C14orf177  283598  chromosome 14 open reading frame 177
Aliases
GeneCards (Weizmann)C14orf177
Ensembl hg19 (Hinxton)ENSG00000176605 [Gene_View]  chr14:99177950-99184103 [Contig_View]  C14orf177 [Vega]
Ensembl hg38 (Hinxton)ENSG00000176605 [Gene_View]  chr14:99177950-99184103 [Contig_View]  C14orf177 [Vega]
ICGC DataPortalENSG00000176605
TCGA cBioPortalC14orf177
AceView (NCBI)C14orf177
Genatlas (Paris)C14orf177
WikiGenes283598
SOURCE (Princeton)C14orf177
Genetics Home Reference (NIH)C14orf177
Genomic and cartography
GoldenPath hg19 (UCSC)C14orf177  -     chr14:99177950-99184103 +  14q32.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)C14orf177  -     14q32.2   [Description]    (hg38-Dec_2013)
EnsemblC14orf177 - 14q32.2 [CytoView hg19]  C14orf177 - 14q32.2 [CytoView hg38]
Mapping of homologs : NCBIC14orf177 [Mapview hg19]  C14orf177 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK098639 BC093661 DB523204
RefSeq transcript (Entrez)NM_182560
RefSeq genomic (Entrez)NC_000014 NC_018925 NT_026437 NW_004929393
Consensus coding sequences : CCDS (NCBI)C14orf177
Cluster EST : UnigeneHs.448754 [ NCBI ]
CGAP (NCI)Hs.448754
Alternative Splicing GalleryENSG00000176605
Gene ExpressionC14orf177 [ NCBI-GEO ]   C14orf177 [ EBI - ARRAY_EXPRESS ]   C14orf177 [ SEEK ]   C14orf177 [ MEM ]
Gene Expression Viewer (FireBrowse)C14orf177 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)283598
GTEX Portal (Tissue expression)C14orf177
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ52M58   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ52M58  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ52M58
Splice isoforms : SwissVarQ52M58
PhosPhoSitePlusQ52M58
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)C14orf177
DMDM Disease mutations283598
Blocks (Seattle)C14orf177
SuperfamilyQ52M58
Human Protein AtlasENSG00000176605
Peptide AtlasQ52M58
HPRD08075
IPIIPI00297704   IPI01009706   
Protein Interaction databases
DIP (DOE-UCLA)Q52M58
IntAct (EBI)Q52M58
FunCoupENSG00000176605
BioGRIDC14orf177
STRING (EMBL)C14orf177
ZODIACC14orf177
Ontologies - Pathways
QuickGOQ52M58
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkC14orf177
Atlas of Cancer Signalling NetworkC14orf177
Wikipedia pathwaysC14orf177
Orthology - Evolution
OrthoDB283598
GeneTree (enSembl)ENSG00000176605
Phylogenetic Trees/Animal Genes : TreeFamC14orf177
HOVERGENQ52M58
HOGENOMQ52M58
Homologs : HomoloGeneC14orf177
Homology/Alignments : Family Browser (UCSC)C14orf177
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerC14orf177 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)C14orf177
dbVarC14orf177
ClinVarC14orf177
1000_GenomesC14orf177 
Exome Variant ServerC14orf177
ExAC (Exome Aggregation Consortium)C14orf177 (select the gene name)
Genetic variants : HAPMAP283598
Genomic Variants (DGV)C14orf177 [DGVbeta]
DECIPHER (Syndromes)14:99177950-99184103  ENSG00000176605
CONAN: Copy Number AnalysisC14orf177 
Mutations
ICGC Data PortalC14orf177 
TCGA Data PortalC14orf177 
Broad Tumor PortalC14orf177
OASIS PortalC14orf177 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICC14orf177  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDC14orf177
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch C14orf177
DgiDB (Drug Gene Interaction Database)C14orf177
DoCM (Curated mutations)C14orf177 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)C14orf177 (select a term)
intoGenC14orf177
Cancer3DC14orf177(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenC14orf177
Genetic Testing Registry C14orf177
NextProtQ52M58 [Medical]
TSGene283598
GENETestsC14orf177
Huge Navigator C14orf177 [HugePedia]
snp3D : Map Gene to Disease283598
BioCentury BCIQC14orf177
ClinGenC14orf177
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD283598
Chemical/Pharm GKB GenePA145149653
Clinical trialC14orf177
Miscellaneous
canSAR (ICR)C14orf177 (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineC14orf177
EVEXC14orf177
GoPubMedC14orf177
iHOPC14orf177
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 11:56:29 CET 2017

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