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C14orf178 (chromosome 14 open reading frame 178)

Identity

Alias_symbol (synonym)FLJ25976
Other alias-
HGNC (Hugo) C14orf178
LocusID (NCBI) 283579
Atlas_Id 60935
Location 14q24.3  [Link to chromosome band 14q24]
Location_base_pair Starts at 77760830 and ends at 77769742 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)C14orf178   26385
Cards
Entrez_Gene (NCBI)C14orf178  283579  chromosome 14 open reading frame 178
Aliases
GeneCards (Weizmann)C14orf178
Ensembl hg19 (Hinxton)ENSG00000197734 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000197734 [Gene_View]  chr14:77760830-77769742 [Contig_View]  C14orf178 [Vega]
ICGC DataPortalENSG00000197734
TCGA cBioPortalC14orf178
AceView (NCBI)C14orf178
Genatlas (Paris)C14orf178
WikiGenes283579
SOURCE (Princeton)C14orf178
Genetics Home Reference (NIH)C14orf178
Genomic and cartography
GoldenPath hg38 (UCSC)C14orf178  -     chr14:77760830-77769742 +  14q24.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)C14orf178  -     14q24.3   [Description]    (hg19-Feb_2009)
EnsemblC14orf178 - 14q24.3 [CytoView hg19]  C14orf178 - 14q24.3 [CytoView hg38]
Mapping of homologs : NCBIC14orf178 [Mapview hg19]  C14orf178 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK098842 BC107147 BC113929 BC113986
RefSeq transcript (Entrez)NM_001173978 NM_174943
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)C14orf178
Cluster EST : UnigeneHs.375834 [ NCBI ]
CGAP (NCI)Hs.375834
Alternative Splicing GalleryENSG00000197734
Gene ExpressionC14orf178 [ NCBI-GEO ]   C14orf178 [ EBI - ARRAY_EXPRESS ]   C14orf178 [ SEEK ]   C14orf178 [ MEM ]
Gene Expression Viewer (FireBrowse)C14orf178 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)283579
GTEX Portal (Tissue expression)C14orf178
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N769   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N769  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N769
Splice isoforms : SwissVarQ8N769
PhosPhoSitePlusQ8N769
Domains : Interpro (EBI)Gasdermin   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)C14orf178
DMDM Disease mutations283579
Blocks (Seattle)C14orf178
SuperfamilyQ8N769
Human Protein AtlasENSG00000197734
Peptide AtlasQ8N769
HPRD08080
IPIIPI00329675   IPI00827546   IPI00956514   IPI00827765   
Protein Interaction databases
DIP (DOE-UCLA)Q8N769
IntAct (EBI)Q8N769
FunCoupENSG00000197734
BioGRIDC14orf178
STRING (EMBL)C14orf178
ZODIACC14orf178
Ontologies - Pathways
QuickGOQ8N769
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkC14orf178
Atlas of Cancer Signalling NetworkC14orf178
Wikipedia pathwaysC14orf178
Orthology - Evolution
OrthoDB283579
GeneTree (enSembl)ENSG00000197734
Phylogenetic Trees/Animal Genes : TreeFamC14orf178
HOVERGENQ8N769
HOGENOMQ8N769
Homologs : HomoloGeneC14orf178
Homology/Alignments : Family Browser (UCSC)C14orf178
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerC14orf178 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)C14orf178
dbVarC14orf178
ClinVarC14orf178
1000_GenomesC14orf178 
Exome Variant ServerC14orf178
ExAC (Exome Aggregation Consortium)C14orf178 (select the gene name)
Genetic variants : HAPMAP283579
Genomic Variants (DGV)C14orf178 [DGVbeta]
DECIPHERC14orf178 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisC14orf178 
Mutations
ICGC Data PortalC14orf178 
TCGA Data PortalC14orf178 
Broad Tumor PortalC14orf178
OASIS PortalC14orf178 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICC14orf178  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDC14orf178
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch C14orf178
DgiDB (Drug Gene Interaction Database)C14orf178
DoCM (Curated mutations)C14orf178 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)C14orf178 (select a term)
intoGenC14orf178
Cancer3DC14orf178(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenC14orf178
Genetic Testing Registry C14orf178
NextProtQ8N769 [Medical]
TSGene283579
GENETestsC14orf178
Target ValidationC14orf178
Huge Navigator C14orf178 [HugePedia]
snp3D : Map Gene to Disease283579
BioCentury BCIQC14orf178
ClinGenC14orf178
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD283579
Chemical/Pharm GKB GenePA145149665
Clinical trialC14orf178
Miscellaneous
canSAR (ICR)C14orf178 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineC14orf178
EVEXC14orf178
GoPubMedC14orf178
iHOPC14orf178
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 15:40:21 CEST 2017

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