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C14orf180 (chromosome 14 open reading frame 180)

Identity

Alias_namesC14orf77
chromosome 14 open reading frame 77
Alias_symbol (synonym)NRAC
Other alias
HGNC (Hugo) C14orf180
LocusID (NCBI) 400258
Atlas_Id 60936
Location 14q32.33  [Link to chromosome band 14q32]
Location_base_pair Starts at 104579684 and ends at 104589847 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)C14orf180   33795
Cards
Entrez_Gene (NCBI)C14orf180  400258  chromosome 14 open reading frame 180
AliasesC14orf77; NRAC
GeneCards (Weizmann)C14orf180
Ensembl hg19 (Hinxton)ENSG00000184601 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000184601 [Gene_View]  chr14:104579684-104589847 [Contig_View]  C14orf180 [Vega]
ICGC DataPortalENSG00000184601
TCGA cBioPortalC14orf180
AceView (NCBI)C14orf180
Genatlas (Paris)C14orf180
WikiGenes400258
SOURCE (Princeton)C14orf180
Genetics Home Reference (NIH)C14orf180
Genomic and cartography
GoldenPath hg38 (UCSC)C14orf180  -     chr14:104579684-104589847 +  14q32.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)C14orf180  -     14q32.33   [Description]    (hg19-Feb_2009)
EnsemblC14orf180 - 14q32.33 [CytoView hg19]  C14orf180 - 14q32.33 [CytoView hg38]
Mapping of homologs : NCBIC14orf180 [Mapview hg19]  C14orf180 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK095913 AK297818 AK309489 AW451284 BC041103
RefSeq transcript (Entrez)NM_001008404 NM_001286399 NM_001286400
RefSeq genomic (Entrez)NC_000014 NC_018925 NT_187599
Consensus coding sequences : CCDS (NCBI)C14orf180
Cluster EST : UnigeneHs.153827 [ NCBI ]
CGAP (NCI)Hs.153827
Alternative Splicing GalleryENSG00000184601
Gene ExpressionC14orf180 [ NCBI-GEO ]   C14orf180 [ EBI - ARRAY_EXPRESS ]   C14orf180 [ SEEK ]   C14orf180 [ MEM ]
Gene Expression Viewer (FireBrowse)C14orf180 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)400258
GTEX Portal (Tissue expression)C14orf180
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N912   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N912  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N912
Splice isoforms : SwissVarQ8N912
PhosPhoSitePlusQ8N912
Domains : Interpro (EBI)DUF4658   
Domain families : Pfam (Sanger)DUF4658 (PF15555)   
Domain families : Pfam (NCBI)pfam15555   
Conserved Domain (NCBI)C14orf180
DMDM Disease mutations400258
Blocks (Seattle)C14orf180
SuperfamilyQ8N912
Human Protein AtlasENSG00000184601
Peptide AtlasQ8N912
HPRD17383
IPIIPI00167543   IPI00910525   IPI01025893   
Protein Interaction databases
DIP (DOE-UCLA)Q8N912
IntAct (EBI)Q8N912
FunCoupENSG00000184601
BioGRIDC14orf180
STRING (EMBL)C14orf180
ZODIACC14orf180
Ontologies - Pathways
QuickGOQ8N912
Ontology : AmiGOplasma membrane  integral component of membrane  
Ontology : EGO-EBIplasma membrane  integral component of membrane  
NDEx NetworkC14orf180
Atlas of Cancer Signalling NetworkC14orf180
Wikipedia pathwaysC14orf180
Orthology - Evolution
OrthoDB400258
GeneTree (enSembl)ENSG00000184601
Phylogenetic Trees/Animal Genes : TreeFamC14orf180
HOVERGENQ8N912
HOGENOMQ8N912
Homologs : HomoloGeneC14orf180
Homology/Alignments : Family Browser (UCSC)C14orf180
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerC14orf180 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)C14orf180
dbVarC14orf180
ClinVarC14orf180
1000_GenomesC14orf180 
Exome Variant ServerC14orf180
ExAC (Exome Aggregation Consortium)C14orf180 (select the gene name)
Genetic variants : HAPMAP400258
Genomic Variants (DGV)C14orf180 [DGVbeta]
DECIPHERC14orf180 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisC14orf180 
Mutations
ICGC Data PortalC14orf180 
TCGA Data PortalC14orf180 
Broad Tumor PortalC14orf180
OASIS PortalC14orf180 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICC14orf180  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDC14orf180
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch C14orf180
DgiDB (Drug Gene Interaction Database)C14orf180
DoCM (Curated mutations)C14orf180 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)C14orf180 (select a term)
intoGenC14orf180
Cancer3DC14orf180(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenC14orf180
Genetic Testing Registry C14orf180
NextProtQ8N912 [Medical]
TSGene400258
GENETestsC14orf180
Target ValidationC14orf180
Huge Navigator C14orf180 [HugePedia]
snp3D : Map Gene to Disease400258
BioCentury BCIQC14orf180
ClinGenC14orf180
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD400258
Chemical/Pharm GKB GenePA162378139
Clinical trialC14orf180
Miscellaneous
canSAR (ICR)C14orf180 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineC14orf180
EVEXC14orf180
GoPubMedC14orf180
iHOPC14orf180
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:40:21 CEST 2017

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