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C14orf2 (chromosome 14 open reading frame 2)

Identity

Alias_symbol (synonym)MP68
Other aliasPLPM
HGNC (Hugo) C14orf2
LocusID (NCBI) 9556
Atlas_Id 60938
Location 14q32.33  [Link to chromosome band 14q32]
Location_base_pair Starts at 103912288 and ends at 103921566 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
C14orf2 (14q32.33) / NKAIN3 (8q12.3)C14orf2 (14q32.33) / SLTM (15q22.1)PPP1R13B (14q32.33) / C14orf2 (14q32.33)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)C14orf2   1188
Cards
Entrez_Gene (NCBI)C14orf2  9556  chromosome 14 open reading frame 2
AliasesMP68; PLPM
GeneCards (Weizmann)C14orf2
Ensembl hg19 (Hinxton)ENSG00000156411 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000156411 [Gene_View]  chr14:103912288-103921566 [Contig_View]  C14orf2 [Vega]
ICGC DataPortalENSG00000156411
TCGA cBioPortalC14orf2
AceView (NCBI)C14orf2
Genatlas (Paris)C14orf2
WikiGenes9556
SOURCE (Princeton)C14orf2
Genetics Home Reference (NIH)C14orf2
Genomic and cartography
GoldenPath hg38 (UCSC)C14orf2  -     chr14:103912288-103921566 -  14q32.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)C14orf2  -     14q32.33   [Description]    (hg19-Feb_2009)
EnsemblC14orf2 - 14q32.33 [CytoView hg19]  C14orf2 - 14q32.33 [CytoView hg38]
Mapping of homologs : NCBIC14orf2 [Mapview hg19]  C14orf2 [Mapview hg38]
OMIM604573   
Gene and transcription
Genbank (Entrez)AF054175 AF116639 AK309355 AK309499 AK310120
RefSeq transcript (Entrez)NM_001127393 NM_004894
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)C14orf2
Cluster EST : UnigeneHs.109052 [ NCBI ]
CGAP (NCI)Hs.109052
Alternative Splicing GalleryENSG00000156411
Gene ExpressionC14orf2 [ NCBI-GEO ]   C14orf2 [ EBI - ARRAY_EXPRESS ]   C14orf2 [ SEEK ]   C14orf2 [ MEM ]
Gene Expression Viewer (FireBrowse)C14orf2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)9556
GTEX Portal (Tissue expression)C14orf2
Protein : pattern, domain, 3D structure
UniProt/SwissProtP56378   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP56378  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP56378
Splice isoforms : SwissVarP56378
PhosPhoSitePlusP56378
Domains : Interpro (EBI)Mit_proteolip   
Domain families : Pfam (Sanger)Mit_proteolip (PF08039)   
Domain families : Pfam (NCBI)pfam08039   
Conserved Domain (NCBI)C14orf2
DMDM Disease mutations9556
Blocks (Seattle)C14orf2
SuperfamilyP56378
Human Protein AtlasENSG00000156411
Peptide AtlasP56378
HPRD05199
IPIIPI00749237   IPI01024908   IPI01024775   IPI00009247   
Protein Interaction databases
DIP (DOE-UCLA)P56378
IntAct (EBI)P56378
FunCoupENSG00000156411
BioGRIDC14orf2
STRING (EMBL)C14orf2
ZODIACC14orf2
Ontologies - Pathways
QuickGOP56378
Ontology : AmiGOmolecular_function  cellular_component  mitochondrial proton-transporting ATP synthase complex  biological_process  integral component of membrane  
Ontology : EGO-EBImolecular_function  cellular_component  mitochondrial proton-transporting ATP synthase complex  biological_process  integral component of membrane  
NDEx NetworkC14orf2
Atlas of Cancer Signalling NetworkC14orf2
Wikipedia pathwaysC14orf2
Orthology - Evolution
OrthoDB9556
GeneTree (enSembl)ENSG00000156411
Phylogenetic Trees/Animal Genes : TreeFamC14orf2
HOVERGENP56378
HOGENOMP56378
Homologs : HomoloGeneC14orf2
Homology/Alignments : Family Browser (UCSC)C14orf2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerC14orf2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)C14orf2
dbVarC14orf2
ClinVarC14orf2
1000_GenomesC14orf2 
Exome Variant ServerC14orf2
ExAC (Exome Aggregation Consortium)C14orf2 (select the gene name)
Genetic variants : HAPMAP9556
Genomic Variants (DGV)C14orf2 [DGVbeta]
DECIPHERC14orf2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisC14orf2 
Mutations
ICGC Data PortalC14orf2 
TCGA Data PortalC14orf2 
Broad Tumor PortalC14orf2
OASIS PortalC14orf2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICC14orf2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDC14orf2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)MSeqDR-LSDB Mitochondrial Disease Locus Specific Database
BioMutasearch C14orf2
DgiDB (Drug Gene Interaction Database)C14orf2
DoCM (Curated mutations)C14orf2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)C14orf2 (select a term)
intoGenC14orf2
Cancer3DC14orf2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM604573   
Orphanet
MedgenC14orf2
Genetic Testing Registry C14orf2
NextProtP56378 [Medical]
TSGene9556
GENETestsC14orf2
Target ValidationC14orf2
Huge Navigator C14orf2 [HugePedia]
snp3D : Map Gene to Disease9556
BioCentury BCIQC14orf2
ClinGenC14orf2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD9556
Chemical/Pharm GKB GenePA25514
Clinical trialC14orf2
Miscellaneous
canSAR (ICR)C14orf2 (select the gene name)
Probes
Litterature
PubMed10 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineC14orf2
EVEXC14orf2
GoPubMedC14orf2
iHOPC14orf2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:40:22 CEST 2017

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