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C14orf37 (chromosome 14 open reading frame 37)

Identity

Other aliasUT2
c14_5376
HGNC (Hugo) C14orf37
LocusID (NCBI) 145407
Atlas_Id 60940
Location 14q23.1  [Link to chromosome band 14q23]
Location_base_pair Starts at 58004056 and ends at 58152239 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
ARID4A (14q23.1) / C14orf37 (14q23.1)C14orf37 (14q23.1) / C14orf37 (14q23.1)C14orf37 (14q23.1) / DENR (12q24.31)
C14orf37 (14q23.1) / ENTPD4 (8p21.3)C14orf37 (14q23.1) / FOXJ3 (1p34.2)C14orf37 (14q23.1) / KIAA0586 (14q23.1)
C14orf37 (14q23.1) / PSD3 (8p22)C14orf37 (14q23.1) / TAGLN2 (1q23.2)C9orf91 (9q32) / C14orf37 (14q23.1)
DDX6 (11q23.3) / C14orf37 (14q23.1)HSP90AA1 (14q32.31) / C14orf37 (14q23.1)LRP4 (11p11.2) / C14orf37 (14q23.1)
RAB28 (4p15.33) / C14orf37 (14q23.1)RPP14 (3p14.3) / C14orf37 (14q23.1)TFIP11 (22q12.1) / C14orf37 (14q23.1)
TSPAN9 (12p13.33) / C14orf37 (14q23.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)C14orf37   19846
Cards
Entrez_Gene (NCBI)C14orf37  145407  chromosome 14 open reading frame 37
AliasesUT2; c14_5376
GeneCards (Weizmann)C14orf37
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr14:58004056-58152239 [Contig_View]  C14orf37 [Vega]
TCGA cBioPortalC14orf37
AceView (NCBI)C14orf37
Genatlas (Paris)C14orf37
WikiGenes145407
SOURCE (Princeton)C14orf37
Genetics Home Reference (NIH)C14orf37
Genomic and cartography
GoldenPath hg38 (UCSC)C14orf37  -     chr14:58004056-58152239 -  14q23.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)C14orf37  -     14q23.1   [Description]    (hg19-Feb_2009)
EnsemblC14orf37 - 14q23.1 [CytoView hg19]  C14orf37 - 14q23.1 [CytoView hg38]
Mapping of homologs : NCBIC14orf37 [Mapview hg19]  C14orf37 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK292513 AK292605 AK294599 BC013707 BC031314
RefSeq transcript (Entrez)NM_001001872 NM_001320173
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)C14orf37
Cluster EST : UnigeneHs.535420 [ NCBI ]
CGAP (NCI)Hs.535420
Gene ExpressionC14orf37 [ NCBI-GEO ]   C14orf37 [ EBI - ARRAY_EXPRESS ]   C14orf37 [ SEEK ]   C14orf37 [ MEM ]
Gene Expression Viewer (FireBrowse)C14orf37 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)145407
GTEX Portal (Tissue expression)C14orf37
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ86TY3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ86TY3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ86TY3
Splice isoforms : SwissVarQ86TY3
PhosPhoSitePlusQ86TY3
Domains : Interpro (EBI)DUF4696   
Domain families : Pfam (Sanger)DUF4696 (PF15767)   
Domain families : Pfam (NCBI)pfam15767   
Conserved Domain (NCBI)C14orf37
DMDM Disease mutations145407
Blocks (Seattle)C14orf37
SuperfamilyQ86TY3
Peptide AtlasQ86TY3
HPRD10712
IPIIPI00942872   IPI00384174   IPI00787835   IPI00165125   
Protein Interaction databases
DIP (DOE-UCLA)Q86TY3
IntAct (EBI)Q86TY3
BioGRIDC14orf37
STRING (EMBL)C14orf37
ZODIACC14orf37
Ontologies - Pathways
QuickGOQ86TY3
Ontology : AmiGOintegral component of membrane  
Ontology : EGO-EBIintegral component of membrane  
NDEx NetworkC14orf37
Atlas of Cancer Signalling NetworkC14orf37
Wikipedia pathwaysC14orf37
Orthology - Evolution
OrthoDB145407
Phylogenetic Trees/Animal Genes : TreeFamC14orf37
HOVERGENQ86TY3
HOGENOMQ86TY3
Homologs : HomoloGeneC14orf37
Homology/Alignments : Family Browser (UCSC)C14orf37
Gene fusions - Rearrangements
Fusion: Tumor Portal C14orf37
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerC14orf37 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)C14orf37
dbVarC14orf37
ClinVarC14orf37
1000_GenomesC14orf37 
Exome Variant ServerC14orf37
ExAC (Exome Aggregation Consortium)
Genetic variants : HAPMAP145407
Genomic Variants (DGV)C14orf37 [DGVbeta]
DECIPHERC14orf37 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisC14orf37 
Mutations
ICGC Data PortalC14orf37 
TCGA Data PortalC14orf37 
Broad Tumor PortalC14orf37
OASIS PortalC14orf37 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICC14orf37  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDC14orf37
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch C14orf37
DgiDB (Drug Gene Interaction Database)C14orf37
DoCM (Curated mutations)C14orf37 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)C14orf37 (select a term)
intoGenC14orf37
Cancer3DC14orf37(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenC14orf37
Genetic Testing Registry C14orf37
NextProtQ86TY3 [Medical]
TSGene145407
GENETestsC14orf37
Target ValidationC14orf37
Huge Navigator C14orf37 [HugePedia]
snp3D : Map Gene to Disease145407
BioCentury BCIQC14orf37
ClinGenC14orf37
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD145407
Chemical/Pharm GKB GenePA134941886
Clinical trialC14orf37
Miscellaneous
canSAR (ICR)C14orf37 (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineC14orf37
EVEXC14orf37
GoPubMedC14orf37
iHOPC14orf37
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 11:39:43 CET 2017

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