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C15orf32 (chromosome 15 open reading frame 32)

Identity

Alias_symbol (synonym)FLJ32831
Other alias-
HGNC (Hugo) C15orf32
LocusID (NCBI) 145858
Atlas_Id 60947
Location 15q26.1  [Link to chromosome band 15q26]
Location_base_pair Starts at 93014907 and ends at 93044347 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
CLN3 (16p11.2) / C15orf32 (15q26.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)C15orf32   26549
Cards
Entrez_Gene (NCBI)C15orf32  145858  chromosome 15 open reading frame 32
Aliases
GeneCards (Weizmann)C15orf32
Ensembl hg19 (Hinxton) [Gene_View]  chr15:93014907-93044347 [Contig_View]  C15orf32 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr15:93014907-93044347 [Contig_View]  C15orf32 [Vega]
TCGA cBioPortalC15orf32
AceView (NCBI)C15orf32
Genatlas (Paris)C15orf32
WikiGenes145858
SOURCE (Princeton)C15orf32
Genetics Home Reference (NIH)C15orf32
Genomic and cartography
GoldenPath hg19 (UCSC)C15orf32  -     chr15:93014907-93044347 +  15q26.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)C15orf32  -     15q26.1   [Description]    (hg38-Dec_2013)
EnsemblC15orf32 - 15q26.1 [CytoView hg19]  C15orf32 - 15q26.1 [CytoView hg38]
Mapping of homologs : NCBIC15orf32 [Mapview hg19]  C15orf32 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK057393 BC109252 BC109253 LN608581 LN608582
RefSeq transcript (Entrez)NM_001301106 NM_153040
RefSeq genomic (Entrez)NC_000015 NC_018926 NT_010194 NW_004929399
Consensus coding sequences : CCDS (NCBI)C15orf32
Cluster EST : UnigeneHs.367879 [ NCBI ]
CGAP (NCI)Hs.367879
Gene ExpressionC15orf32 [ NCBI-GEO ]   C15orf32 [ EBI - ARRAY_EXPRESS ]   C15orf32 [ SEEK ]   C15orf32 [ MEM ]
Gene Expression Viewer (FireBrowse)C15orf32 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)145858
GTEX Portal (Tissue expression)C15orf32
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ32M92   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ32M92  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ32M92
Splice isoforms : SwissVarQ32M92
PhosPhoSitePlusQ32M92
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)C15orf32
DMDM Disease mutations145858
Blocks (Seattle)C15orf32
SuperfamilyQ32M92
Peptide AtlasQ32M92
HPRD08143
IPIIPI00065284   IPI00760948   
Protein Interaction databases
DIP (DOE-UCLA)Q32M92
IntAct (EBI)Q32M92
BioGRIDC15orf32
STRING (EMBL)C15orf32
ZODIACC15orf32
Ontologies - Pathways
QuickGOQ32M92
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkC15orf32
Atlas of Cancer Signalling NetworkC15orf32
Wikipedia pathwaysC15orf32
Orthology - Evolution
OrthoDB145858
Phylogenetic Trees/Animal Genes : TreeFamC15orf32
HOVERGENQ32M92
HOGENOMQ32M92
Homologs : HomoloGeneC15orf32
Homology/Alignments : Family Browser (UCSC)C15orf32
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerC15orf32 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)C15orf32
dbVarC15orf32
ClinVarC15orf32
1000_GenomesC15orf32 
Exome Variant ServerC15orf32
ExAC (Exome Aggregation Consortium)C15orf32 (select the gene name)
Genetic variants : HAPMAP145858
Genomic Variants (DGV)C15orf32 [DGVbeta]
DECIPHER (Syndromes)15:93014907-93044347  
CONAN: Copy Number AnalysisC15orf32 
Mutations
ICGC Data PortalC15orf32 
TCGA Data PortalC15orf32 
Broad Tumor PortalC15orf32
OASIS PortalC15orf32 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICC15orf32  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDC15orf32
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch C15orf32
DgiDB (Drug Gene Interaction Database)C15orf32
DoCM (Curated mutations)C15orf32 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)C15orf32 (select a term)
intoGenC15orf32
Cancer3DC15orf32(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenC15orf32
Genetic Testing Registry C15orf32
NextProtQ32M92 [Medical]
TSGene145858
GENETestsC15orf32
Huge Navigator C15orf32 [HugePedia]
snp3D : Map Gene to Disease145858
BioCentury BCIQC15orf32
ClinGenC15orf32
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD145858
Chemical/Pharm GKB GenePA142672268
Clinical trialC15orf32
Miscellaneous
canSAR (ICR)C15orf32 (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineC15orf32
EVEXC15orf32
GoPubMedC15orf32
iHOPC15orf32
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 11:56:32 CET 2017

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