Atlas of Genetics and Cytogenetics in Oncology and Haematology


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C15orf38-AP3S2 (C15orf38-AP3S2 readthrough)

Identity

Other alias-
HGNC (Hugo) C15orf38-AP3S2
LocusID (NCBI) 100526783
Atlas_Id 60948
Location 15q26.1  [Link to chromosome band 15q26]
Location_base_pair Starts at 89830599 and ends at 89912990 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
ARHGAP21 (10p12.1) / C15orf38-AP3S2 (15q26.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)C15orf38-AP3S2   38824
Cards
Entrez_Gene (NCBI)C15orf38-AP3S2  100526783  C15orf38-AP3S2 readthrough
Aliases
GeneCards (Weizmann)C15orf38-AP3S2
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr15:89830599-89912990 [Contig_View]  C15orf38-AP3S2 [Vega]
TCGA cBioPortalC15orf38-AP3S2
AceView (NCBI)C15orf38-AP3S2
Genatlas (Paris)C15orf38-AP3S2
WikiGenes100526783
SOURCE (Princeton)C15orf38-AP3S2
Genetics Home Reference (NIH)C15orf38-AP3S2
Genomic and cartography
GoldenPath hg38 (UCSC)C15orf38-AP3S2  -     chr15:89830599-89912990 -  15q26.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)C15orf38-AP3S2  -     15q26.1   [Description]    (hg19-Feb_2009)
EnsemblC15orf38-AP3S2 - 15q26.1 [CytoView hg19]  C15orf38-AP3S2 - 15q26.1 [CytoView hg38]
Mapping of homologs : NCBIC15orf38-AP3S2 [Mapview hg19]  C15orf38-AP3S2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK000495
RefSeq transcript (Entrez)NM_001199058
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)C15orf38-AP3S2
Cluster EST : UnigeneHs.744890 [ NCBI ]
CGAP (NCI)Hs.744890
Gene ExpressionC15orf38-AP3S2 [ NCBI-GEO ]   C15orf38-AP3S2 [ EBI - ARRAY_EXPRESS ]   C15orf38-AP3S2 [ SEEK ]   C15orf38-AP3S2 [ MEM ]
Gene Expression Viewer (FireBrowse)C15orf38-AP3S2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100526783
GTEX Portal (Tissue expression)C15orf38-AP3S2
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)C15orf38-AP3S2
DMDM Disease mutations100526783
Blocks (Seattle)C15orf38-AP3S2
Protein Interaction databases
BioGRIDC15orf38-AP3S2
STRING (EMBL)C15orf38-AP3S2
ZODIACC15orf38-AP3S2
Ontologies - Pathways
Huge Navigator C15orf38-AP3S2 [HugePedia]
snp3D : Map Gene to Disease100526783
BioCentury BCIQC15orf38-AP3S2
ClinGenC15orf38-AP3S2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100526783
Clinical trialC15orf38-AP3S2
Miscellaneous
canSAR (ICR)C15orf38-AP3S2 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineC15orf38-AP3S2
EVEXC15orf38-AP3S2
GoPubMedC15orf38-AP3S2
iHOPC15orf38-AP3S2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:02:47 CEST 2017

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