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C16orf95 (chromosome 16 open reading frame 95)

Identity

Other alias-
HGNC (Hugo) C16orf95
LocusID (NCBI) 100506581
Atlas_Id 60980
Location 16q24.2  [Link to chromosome band 16q24]
Location_base_pair Starts at 87302799 and ends at 87317420 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)C16orf95   40033
Cards
Entrez_Gene (NCBI)C16orf95  100506581  chromosome 16 open reading frame 95
Aliases
GeneCards (Weizmann)C16orf95
Ensembl hg19 (Hinxton)ENSG00000260456 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000260456 [Gene_View]  chr16:87302799-87317420 [Contig_View]  C16orf95 [Vega]
ICGC DataPortalENSG00000260456
TCGA cBioPortalC16orf95
AceView (NCBI)C16orf95
Genatlas (Paris)C16orf95
WikiGenes100506581
SOURCE (Princeton)C16orf95
Genetics Home Reference (NIH)C16orf95
Genomic and cartography
GoldenPath hg38 (UCSC)C16orf95  -     chr16:87302799-87317420 -  16q24.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)C16orf95  -     16q24.2   [Description]    (hg19-Feb_2009)
EnsemblC16orf95 - 16q24.2 [CytoView hg19]  C16orf95 - 16q24.2 [CytoView hg38]
Mapping of homologs : NCBIC16orf95 [Mapview hg19]  C16orf95 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AB371437 AK026130 AL136762 AM392822 AM393070
RefSeq transcript (Entrez)NM_001195124 NM_001195125 NM_001256917
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)C16orf95
Cluster EST : UnigeneHs.729380 [ NCBI ]
CGAP (NCI)Hs.729380
Alternative Splicing GalleryENSG00000260456
Gene ExpressionC16orf95 [ NCBI-GEO ]   C16orf95 [ EBI - ARRAY_EXPRESS ]   C16orf95 [ SEEK ]   C16orf95 [ MEM ]
Gene Expression Viewer (FireBrowse)C16orf95 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100506581
GTEX Portal (Tissue expression)C16orf95
Human Protein AtlasENSG00000260456-C16orf95 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9H693   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9H693  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9H693
Splice isoforms : SwissVarQ9H693
PhosPhoSitePlusQ9H693
Domains : Interpro (EBI)DUF4568   
Domain families : Pfam (Sanger)DUF4568 (PF15132)   
Domain families : Pfam (NCBI)pfam15132   
Conserved Domain (NCBI)C16orf95
DMDM Disease mutations100506581
Blocks (Seattle)C16orf95
SuperfamilyQ9H693
Human Protein Atlas [tissue]ENSG00000260456-C16orf95 [tissue]
Peptide AtlasQ9H693
IPIIPI00829932   
Protein Interaction databases
DIP (DOE-UCLA)Q9H693
IntAct (EBI)Q9H693
FunCoupENSG00000260456
BioGRIDC16orf95
STRING (EMBL)C16orf95
ZODIACC16orf95
Ontologies - Pathways
QuickGOQ9H693
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkC16orf95
Atlas of Cancer Signalling NetworkC16orf95
Wikipedia pathwaysC16orf95
Orthology - Evolution
OrthoDB100506581
GeneTree (enSembl)ENSG00000260456
Phylogenetic Trees/Animal Genes : TreeFamC16orf95
HOVERGENQ9H693
HOGENOMQ9H693
Homologs : HomoloGeneC16orf95
Homology/Alignments : Family Browser (UCSC)C16orf95
Gene fusions - Rearrangements
Tumor Fusion PortalC16orf95
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerC16orf95 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)C16orf95
dbVarC16orf95
ClinVarC16orf95
1000_GenomesC16orf95 
Exome Variant ServerC16orf95
ExAC (Exome Aggregation Consortium)ENSG00000260456
GNOMAD BrowserENSG00000260456
Genetic variants : HAPMAP100506581
Genomic Variants (DGV)C16orf95 [DGVbeta]
DECIPHERC16orf95 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisC16orf95 
Mutations
ICGC Data PortalC16orf95 
TCGA Data PortalC16orf95 
Broad Tumor PortalC16orf95
OASIS PortalC16orf95 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICC16orf95  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDC16orf95
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch C16orf95
DgiDB (Drug Gene Interaction Database)C16orf95
DoCM (Curated mutations)C16orf95 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)C16orf95 (select a term)
intoGenC16orf95
Cancer3DC16orf95(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETC16orf95
MedgenC16orf95
Genetic Testing Registry C16orf95
NextProtQ9H693 [Medical]
TSGene100506581
GENETestsC16orf95
Target ValidationC16orf95
Huge Navigator C16orf95 [HugePedia]
snp3D : Map Gene to Disease100506581
BioCentury BCIQC16orf95
ClinGenC16orf95
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100506581
Chemical/Pharm GKB GenePA166049055
Clinical trialC16orf95
Miscellaneous
canSAR (ICR)C16orf95 (select the gene name)
Probes
Litterature
PubMed8 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineC16orf95
EVEXC16orf95
GoPubMedC16orf95
iHOPC16orf95
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:32:56 CET 2017

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