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C17orf74 (chromosome 17 open reading frame 74)

Identity

Other alias-
HGNC (Hugo) C17orf74
LocusID (NCBI) 201243
Atlas_Id 60999
Location 17p13.1  [Link to chromosome band 17p13]
Location_base_pair Starts at 7425616 and ends at 7427567 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)C17orf74   27315
Cards
Entrez_Gene (NCBI)C17orf74  201243  chromosome 17 open reading frame 74
Aliases
GeneCards (Weizmann)C17orf74
Ensembl hg19 (Hinxton)ENSG00000184560 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000184560 [Gene_View]  chr17:7425616-7427567 [Contig_View]  C17orf74 [Vega]
ICGC DataPortalENSG00000184560
TCGA cBioPortalC17orf74
AceView (NCBI)C17orf74
Genatlas (Paris)C17orf74
WikiGenes201243
SOURCE (Princeton)C17orf74
Genetics Home Reference (NIH)C17orf74
Genomic and cartography
GoldenPath hg38 (UCSC)C17orf74  -     chr17:7425616-7427567 +  17p13.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)C17orf74  -     17p13.1   [Description]    (hg19-Feb_2009)
EnsemblC17orf74 - 17p13.1 [CytoView hg19]  C17orf74 - 17p13.1 [CytoView hg38]
Mapping of homologs : NCBIC17orf74 [Mapview hg19]  C17orf74 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC031286 BC044816 BC048010
RefSeq transcript (Entrez)NM_175734
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)C17orf74
Cluster EST : UnigeneHs.380704 [ NCBI ]
CGAP (NCI)Hs.380704
Alternative Splicing GalleryENSG00000184560
Gene ExpressionC17orf74 [ NCBI-GEO ]   C17orf74 [ EBI - ARRAY_EXPRESS ]   C17orf74 [ SEEK ]   C17orf74 [ MEM ]
Gene Expression Viewer (FireBrowse)C17orf74 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)201243
GTEX Portal (Tissue expression)C17orf74
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ0P670   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ0P670  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ0P670
Splice isoforms : SwissVarQ0P670
PhosPhoSitePlusQ0P670
Domains : Interpro (EBI)SPEM1_N   
Domain families : Pfam (Sanger)Spem1 (PF15670)   
Domain families : Pfam (NCBI)pfam15670   
Conserved Domain (NCBI)C17orf74
DMDM Disease mutations201243
Blocks (Seattle)C17orf74
SuperfamilyQ0P670
Human Protein AtlasENSG00000184560
Peptide AtlasQ0P670
HPRD14128
IPIIPI00329357   
Protein Interaction databases
DIP (DOE-UCLA)Q0P670
IntAct (EBI)Q0P670
FunCoupENSG00000184560
BioGRIDC17orf74
STRING (EMBL)C17orf74
ZODIACC17orf74
Ontologies - Pathways
QuickGOQ0P670
Ontology : AmiGOintegral component of membrane  
Ontology : EGO-EBIintegral component of membrane  
NDEx NetworkC17orf74
Atlas of Cancer Signalling NetworkC17orf74
Wikipedia pathwaysC17orf74
Orthology - Evolution
OrthoDB201243
GeneTree (enSembl)ENSG00000184560
Phylogenetic Trees/Animal Genes : TreeFamC17orf74
HOVERGENQ0P670
HOGENOMQ0P670
Homologs : HomoloGeneC17orf74
Homology/Alignments : Family Browser (UCSC)C17orf74
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerC17orf74 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)C17orf74
dbVarC17orf74
ClinVarC17orf74
1000_GenomesC17orf74 
Exome Variant ServerC17orf74
ExAC (Exome Aggregation Consortium)C17orf74 (select the gene name)
Genetic variants : HAPMAP201243
Genomic Variants (DGV)C17orf74 [DGVbeta]
DECIPHERC17orf74 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisC17orf74 
Mutations
ICGC Data PortalC17orf74 
TCGA Data PortalC17orf74 
Broad Tumor PortalC17orf74
OASIS PortalC17orf74 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICC17orf74  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDC17orf74
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch C17orf74
DgiDB (Drug Gene Interaction Database)C17orf74
DoCM (Curated mutations)C17orf74 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)C17orf74 (select a term)
intoGenC17orf74
Cancer3DC17orf74(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenC17orf74
Genetic Testing Registry C17orf74
NextProtQ0P670 [Medical]
TSGene201243
GENETestsC17orf74
Target ValidationC17orf74
Huge Navigator C17orf74 [HugePedia]
snp3D : Map Gene to Disease201243
BioCentury BCIQC17orf74
ClinGenC17orf74
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD201243
Chemical/Pharm GKB GenePA142672222
Clinical trialC17orf74
Miscellaneous
canSAR (ICR)C17orf74 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineC17orf74
EVEXC17orf74
GoPubMedC17orf74
iHOPC17orf74
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 15:40:35 CEST 2017

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