Atlas of Genetics and Cytogenetics in Oncology and Haematology


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C18orf12 (chromosome 18 open reading frame 12)

Identity

Alias_symbol (synonym)HEIL1
HsT2508
Other alias
HGNC (Hugo) C18orf12
LocusID (NCBI) 84322
Atlas_Id 61009
Location 18q21.1  [Link to chromosome band 18q21]
Location_base_pair Starts at 48252301 and ends at 48252837 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)C18orf12   24918
Cards
Entrez_Gene (NCBI)C18orf12  84322  chromosome 18 open reading frame 12
AliasesHEIL1; HsT2508
GeneCards (Weizmann)C18orf12
Ensembl hg19 (Hinxton)ENSG00000280197 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000280197 [Gene_View]  chr18:48252301-48252837 [Contig_View]  C18orf12 [Vega]
ICGC DataPortalENSG00000280197
TCGA cBioPortalC18orf12
AceView (NCBI)C18orf12
Genatlas (Paris)C18orf12
WikiGenes84322
SOURCE (Princeton)C18orf12
Genetics Home Reference (NIH)C18orf12
Genomic and cartography
GoldenPath hg38 (UCSC)C18orf12  -     chr18:48252301-48252837 +  18q21.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)C18orf12  -     18q21.1   [Description]    (hg19-Feb_2009)
EnsemblC18orf12 - 18q21.1 [CytoView hg19]  C18orf12 - 18q21.1 [CytoView hg38]
Mapping of homologs : NCBIC18orf12 [Mapview hg19]  C18orf12 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AB027121
RefSeq transcript (Entrez)NM_001350280 NM_032362
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)C18orf12
Cluster EST : UnigeneHs.334493 [ NCBI ]
CGAP (NCI)Hs.334493
Alternative Splicing GalleryENSG00000280197
Gene ExpressionC18orf12 [ NCBI-GEO ]   C18orf12 [ EBI - ARRAY_EXPRESS ]   C18orf12 [ SEEK ]   C18orf12 [ MEM ]
Gene Expression Viewer (FireBrowse)C18orf12 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)84322
GTEX Portal (Tissue expression)C18orf12
Human Protein AtlasENSG00000280197-C18orf12 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96KH6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96KH6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96KH6
Splice isoforms : SwissVarQ96KH6
PhosPhoSitePlusQ96KH6
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)C18orf12
DMDM Disease mutations84322
Blocks (Seattle)C18orf12
SuperfamilyQ96KH6
Human Protein Atlas [tissue]ENSG00000280197-C18orf12 [tissue]
Peptide AtlasQ96KH6
IPIIPI00064626   
Protein Interaction databases
DIP (DOE-UCLA)Q96KH6
IntAct (EBI)Q96KH6
FunCoupENSG00000280197
BioGRIDC18orf12
STRING (EMBL)C18orf12
ZODIACC18orf12
Ontologies - Pathways
QuickGOQ96KH6
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkC18orf12
Atlas of Cancer Signalling NetworkC18orf12
Wikipedia pathwaysC18orf12
Orthology - Evolution
OrthoDB84322
GeneTree (enSembl)ENSG00000280197
Phylogenetic Trees/Animal Genes : TreeFamC18orf12
HOVERGENQ96KH6
HOGENOMQ96KH6
Homologs : HomoloGeneC18orf12
Homology/Alignments : Family Browser (UCSC)C18orf12
Gene fusions - Rearrangements
Tumor Fusion PortalC18orf12
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerC18orf12 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)C18orf12
dbVarC18orf12
ClinVarC18orf12
1000_GenomesC18orf12 
Exome Variant ServerC18orf12
ExAC (Exome Aggregation Consortium)ENSG00000280197
GNOMAD BrowserENSG00000280197
Genetic variants : HAPMAP84322
Genomic Variants (DGV)C18orf12 [DGVbeta]
DECIPHERC18orf12 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisC18orf12 
Mutations
ICGC Data PortalC18orf12 
TCGA Data PortalC18orf12 
Broad Tumor PortalC18orf12
OASIS PortalC18orf12 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDC18orf12
BioMutasearch C18orf12
DgiDB (Drug Gene Interaction Database)C18orf12
DoCM (Curated mutations)C18orf12 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)C18orf12 (select a term)
intoGenC18orf12
Cancer3DC18orf12(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETC18orf12
MedgenC18orf12
Genetic Testing Registry C18orf12
NextProtQ96KH6 [Medical]
TSGene84322
GENETestsC18orf12
Target ValidationC18orf12
Huge Navigator C18orf12 [HugePedia]
snp3D : Map Gene to Disease84322
BioCentury BCIQC18orf12
ClinGenC18orf12
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD84322
Chemical/Pharm GKB GenePA134921054
Clinical trialC18orf12
Miscellaneous
canSAR (ICR)C18orf12 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineC18orf12
EVEXC18orf12
GoPubMedC18orf12
iHOPC18orf12
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:37:21 CET 2017

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