Atlas of Genetics and Cytogenetics in Oncology and Haematology


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C18orf63 (chromosome 18 open reading frame 63)

Identity

Alias_symbol (synonym)DKFZP781G0119
Other alias
HGNC (Hugo) C18orf63
LocusID (NCBI) 644041
Atlas_Id 61018
Location 18q22.3  [Link to chromosome band 18q22]
Location_base_pair Starts at 74315875 and ends at 74359187 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)C18orf63   40037
Cards
Entrez_Gene (NCBI)C18orf63  644041  chromosome 18 open reading frame 63
AliasesDKFZP781G0119
GeneCards (Weizmann)C18orf63
Ensembl hg19 (Hinxton)ENSG00000206043 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000206043 [Gene_View]  chr18:74315875-74359187 [Contig_View]  C18orf63 [Vega]
ICGC DataPortalENSG00000206043
TCGA cBioPortalC18orf63
AceView (NCBI)C18orf63
Genatlas (Paris)C18orf63
WikiGenes644041
SOURCE (Princeton)C18orf63
Genetics Home Reference (NIH)C18orf63
Genomic and cartography
GoldenPath hg38 (UCSC)C18orf63  -     chr18:74315875-74359187 +  18q22.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)C18orf63  -     18q22.3   [Description]    (hg19-Feb_2009)
EnsemblC18orf63 - 18q22.3 [CytoView hg19]  C18orf63 - 18q22.3 [CytoView hg38]
Mapping of homologs : NCBIC18orf63 [Mapview hg19]  C18orf63 [Mapview hg38]
Gene and transcription
Genbank (Entrez)CR749350
RefSeq transcript (Entrez)NM_001174123
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)C18orf63
Cluster EST : UnigeneHs.465414 [ NCBI ]
CGAP (NCI)Hs.465414
Alternative Splicing GalleryENSG00000206043
Gene ExpressionC18orf63 [ NCBI-GEO ]   C18orf63 [ EBI - ARRAY_EXPRESS ]   C18orf63 [ SEEK ]   C18orf63 [ MEM ]
Gene Expression Viewer (FireBrowse)C18orf63 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)644041
GTEX Portal (Tissue expression)C18orf63
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ68DL7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ68DL7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ68DL7
Splice isoforms : SwissVarQ68DL7
PhosPhoSitePlusQ68DL7
Domains : Interpro (EBI)DUF4708   
Domain families : Pfam (Sanger)DUF4708 (PF15813)   
Domain families : Pfam (NCBI)pfam15813   
Conserved Domain (NCBI)C18orf63
DMDM Disease mutations644041
Blocks (Seattle)C18orf63
SuperfamilyQ68DL7
Human Protein AtlasENSG00000206043
Peptide AtlasQ68DL7
IPIIPI00873421   
Protein Interaction databases
DIP (DOE-UCLA)Q68DL7
IntAct (EBI)Q68DL7
FunCoupENSG00000206043
BioGRIDC18orf63
STRING (EMBL)C18orf63
ZODIACC18orf63
Ontologies - Pathways
QuickGOQ68DL7
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkC18orf63
Atlas of Cancer Signalling NetworkC18orf63
Wikipedia pathwaysC18orf63
Orthology - Evolution
OrthoDB644041
GeneTree (enSembl)ENSG00000206043
Phylogenetic Trees/Animal Genes : TreeFamC18orf63
HOVERGENQ68DL7
HOGENOMQ68DL7
Homologs : HomoloGeneC18orf63
Homology/Alignments : Family Browser (UCSC)C18orf63
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerC18orf63 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)C18orf63
dbVarC18orf63
ClinVarC18orf63
1000_GenomesC18orf63 
Exome Variant ServerC18orf63
ExAC (Exome Aggregation Consortium)C18orf63 (select the gene name)
Genetic variants : HAPMAP644041
Genomic Variants (DGV)C18orf63 [DGVbeta]
DECIPHERC18orf63 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisC18orf63 
Mutations
ICGC Data PortalC18orf63 
TCGA Data PortalC18orf63 
Broad Tumor PortalC18orf63
OASIS PortalC18orf63 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICC18orf63  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDC18orf63
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch C18orf63
DgiDB (Drug Gene Interaction Database)C18orf63
DoCM (Curated mutations)C18orf63 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)C18orf63 (select a term)
intoGenC18orf63
Cancer3DC18orf63(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenC18orf63
Genetic Testing Registry C18orf63
NextProtQ68DL7 [Medical]
TSGene644041
GENETestsC18orf63
Target ValidationC18orf63
Huge Navigator C18orf63 [HugePedia]
snp3D : Map Gene to Disease644041
BioCentury BCIQC18orf63
ClinGenC18orf63
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD644041
Chemical/Pharm GKB GenePA166049057
Clinical trialC18orf63
Miscellaneous
canSAR (ICR)C18orf63 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineC18orf63
EVEXC18orf63
GoPubMedC18orf63
iHOPC18orf63
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:02:57 CEST 2017

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