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C18orf65 (chromosome 18 open reading frame 65)

Identity

Other alias-
HGNC (Hugo) C18orf65
LocusID (NCBI) 400658
Atlas_Id 61019
Location 18q23  [Link to chromosome band 18q23]
Location_base_pair Starts at 74207477 and ends at 74210045 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)C18orf65   51248
Cards
Entrez_Gene (NCBI)C18orf65  400658  chromosome 18 open reading frame 65
Aliases
GeneCards (Weizmann)C18orf65
Ensembl hg19 (Hinxton)ENSG00000275763 [Gene_View]  chr18:74207477-74210045 [Contig_View]  C18orf65 [Vega]
Ensembl hg38 (Hinxton)ENSG00000275763 [Gene_View]  chr18:74207477-74210045 [Contig_View]  C18orf65 [Vega]
ICGC DataPortalENSG00000275763
TCGA cBioPortalC18orf65
AceView (NCBI)C18orf65
Genatlas (Paris)C18orf65
WikiGenes400658
SOURCE (Princeton)C18orf65
Genetics Home Reference (NIH)C18orf65
Genomic and cartography
GoldenPath hg19 (UCSC)C18orf65  -     chr18:74207477-74210045 +  18q23   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)C18orf65  -     18q23   [Description]    (hg38-Dec_2013)
EnsemblC18orf65 - 18q23 [CytoView hg19]  C18orf65 - 18q23 [CytoView hg38]
Mapping of homologs : NCBIC18orf65 [Mapview hg19]  C18orf65 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK126293 HY337883 LN608675
RefSeq transcript (Entrez)NM_001272093
RefSeq genomic (Entrez)NC_000018 NC_018929 NG_032949 NT_010966 NW_004929411
Consensus coding sequences : CCDS (NCBI)C18orf65
Cluster EST : UnigeneHs.451549 [ NCBI ]
CGAP (NCI)Hs.451549
Alternative Splicing GalleryENSG00000275763
Gene ExpressionC18orf65 [ NCBI-GEO ]   C18orf65 [ EBI - ARRAY_EXPRESS ]   C18orf65 [ SEEK ]   C18orf65 [ MEM ]
Gene Expression Viewer (FireBrowse)C18orf65 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)400658
GTEX Portal (Tissue expression)C18orf65
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6ZTR6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6ZTR6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6ZTR6
Splice isoforms : SwissVarQ6ZTR6
PhosPhoSitePlusQ6ZTR6
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)C18orf65
DMDM Disease mutations400658
Blocks (Seattle)C18orf65
SuperfamilyQ6ZTR6
Human Protein AtlasENSG00000275763
Peptide AtlasQ6ZTR6
HPRD13489
IPIIPI00410529   
Protein Interaction databases
DIP (DOE-UCLA)Q6ZTR6
IntAct (EBI)Q6ZTR6
FunCoupENSG00000275763
BioGRIDC18orf65
STRING (EMBL)C18orf65
ZODIACC18orf65
Ontologies - Pathways
QuickGOQ6ZTR6
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkC18orf65
Atlas of Cancer Signalling NetworkC18orf65
Wikipedia pathwaysC18orf65
Orthology - Evolution
OrthoDB400658
GeneTree (enSembl)ENSG00000275763
Phylogenetic Trees/Animal Genes : TreeFamC18orf65
HOVERGENQ6ZTR6
HOGENOMQ6ZTR6
Homologs : HomoloGeneC18orf65
Homology/Alignments : Family Browser (UCSC)C18orf65
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerC18orf65 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)C18orf65
dbVarC18orf65
ClinVarC18orf65
1000_GenomesC18orf65 
Exome Variant ServerC18orf65
ExAC (Exome Aggregation Consortium)C18orf65 (select the gene name)
Genetic variants : HAPMAP400658
Genomic Variants (DGV)C18orf65 [DGVbeta]
DECIPHER (Syndromes)18:74207477-74210045  ENSG00000275763
CONAN: Copy Number AnalysisC18orf65 
Mutations
ICGC Data PortalC18orf65 
TCGA Data PortalC18orf65 
Broad Tumor PortalC18orf65
OASIS PortalC18orf65 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDC18orf65
BioMutasearch C18orf65
DgiDB (Drug Gene Interaction Database)C18orf65
DoCM (Curated mutations)C18orf65 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)C18orf65 (select a term)
intoGenC18orf65
Cancer3DC18orf65(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenC18orf65
Genetic Testing Registry C18orf65
NextProtQ6ZTR6 [Medical]
TSGene400658
GENETestsC18orf65
Huge Navigator C18orf65 [HugePedia]
snp3D : Map Gene to Disease400658
BioCentury BCIQC18orf65
ClinGenC18orf65
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD400658
Clinical trialC18orf65
Miscellaneous
canSAR (ICR)C18orf65 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineC18orf65
EVEXC18orf65
GoPubMedC18orf65
iHOPC18orf65
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 11:56:47 CET 2017

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