Atlas of Genetics and Cytogenetics in Oncology and Haematology


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C19orf67 (chromosome 19 open reading frame 67)

Identity

Other alias-
HGNC (Hugo) C19orf67
LocusID (NCBI) 646457
Atlas_Id 61035
Location 19p13.12  [Link to chromosome band 19p13]
Location_base_pair Starts at 14192444 and ends at 14196607 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)C19orf67   34354
Cards
Entrez_Gene (NCBI)C19orf67  646457  chromosome 19 open reading frame 67
Aliases
GeneCards (Weizmann)C19orf67
Ensembl hg19 (Hinxton)ENSG00000188032 [Gene_View]  chr19:14192444-14196607 [Contig_View]  C19orf67 [Vega]
Ensembl hg38 (Hinxton)ENSG00000188032 [Gene_View]  chr19:14192444-14196607 [Contig_View]  C19orf67 [Vega]
ICGC DataPortalENSG00000188032
TCGA cBioPortalC19orf67
AceView (NCBI)C19orf67
Genatlas (Paris)C19orf67
WikiGenes646457
SOURCE (Princeton)C19orf67
Genetics Home Reference (NIH)C19orf67
Genomic and cartography
GoldenPath hg19 (UCSC)C19orf67  -     chr19:14192444-14196607 -  19p13.12   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)C19orf67  -     19p13.12   [Description]    (hg38-Dec_2013)
EnsemblC19orf67 - 19p13.12 [CytoView hg19]  C19orf67 - 19p13.12 [CytoView hg38]
Mapping of homologs : NCBIC19orf67 [Mapview hg19]  C19orf67 [Mapview hg38]
Gene and transcription
Genbank (Entrez)DN831393 DR008137 DY655148 HY028687 HY212999
RefSeq transcript (Entrez)NM_001277378
RefSeq genomic (Entrez)NC_000019 NC_018930 NT_011295 NW_004929414
Consensus coding sequences : CCDS (NCBI)C19orf67
Cluster EST : UnigeneHs.569971 [ NCBI ]
CGAP (NCI)Hs.569971
Alternative Splicing GalleryENSG00000188032
Gene ExpressionC19orf67 [ NCBI-GEO ]   C19orf67 [ EBI - ARRAY_EXPRESS ]   C19orf67 [ SEEK ]   C19orf67 [ MEM ]
Gene Expression Viewer (FireBrowse)C19orf67 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)646457
GTEX Portal (Tissue expression)C19orf67
Protein : pattern, domain, 3D structure
UniProt/SwissProtA6NJJ6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA6NJJ6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA6NJJ6
Splice isoforms : SwissVarA6NJJ6
PhosPhoSitePlusA6NJJ6
Domains : Interpro (EBI)DUF3314   
Domain families : Pfam (Sanger)DUF3314 (PF11771)   
Domain families : Pfam (NCBI)pfam11771   
Conserved Domain (NCBI)C19orf67
DMDM Disease mutations646457
Blocks (Seattle)C19orf67
SuperfamilyA6NJJ6
Human Protein AtlasENSG00000188032
Peptide AtlasA6NJJ6
IPIIPI00413489   IPI01020868   
Protein Interaction databases
DIP (DOE-UCLA)A6NJJ6
IntAct (EBI)A6NJJ6
FunCoupENSG00000188032
BioGRIDC19orf67
STRING (EMBL)C19orf67
ZODIACC19orf67
Ontologies - Pathways
QuickGOA6NJJ6
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkC19orf67
Atlas of Cancer Signalling NetworkC19orf67
Wikipedia pathwaysC19orf67
Orthology - Evolution
OrthoDB646457
GeneTree (enSembl)ENSG00000188032
Phylogenetic Trees/Animal Genes : TreeFamC19orf67
HOVERGENA6NJJ6
HOGENOMA6NJJ6
Homologs : HomoloGeneC19orf67
Homology/Alignments : Family Browser (UCSC)C19orf67
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerC19orf67 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)C19orf67
dbVarC19orf67
ClinVarC19orf67
1000_GenomesC19orf67 
Exome Variant ServerC19orf67
ExAC (Exome Aggregation Consortium)C19orf67 (select the gene name)
Genetic variants : HAPMAP646457
Genomic Variants (DGV)C19orf67 [DGVbeta]
DECIPHER (Syndromes)19:14192444-14196607  ENSG00000188032
CONAN: Copy Number AnalysisC19orf67 
Mutations
ICGC Data PortalC19orf67 
TCGA Data PortalC19orf67 
Broad Tumor PortalC19orf67
OASIS PortalC19orf67 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICC19orf67  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDC19orf67
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch C19orf67
DgiDB (Drug Gene Interaction Database)C19orf67
DoCM (Curated mutations)C19orf67 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)C19orf67 (select a term)
intoGenC19orf67
Cancer3DC19orf67(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenC19orf67
Genetic Testing Registry C19orf67
NextProtA6NJJ6 [Medical]
TSGene646457
GENETestsC19orf67
Huge Navigator C19orf67 [HugePedia]
snp3D : Map Gene to Disease646457
BioCentury BCIQC19orf67
ClinGenC19orf67
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD646457
Chemical/Pharm GKB GenePA162378830
Clinical trialC19orf67
Miscellaneous
canSAR (ICR)C19orf67 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineC19orf67
EVEXC19orf67
GoPubMedC19orf67
iHOPC19orf67
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 11:56:51 CET 2017

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