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C1QL4 (complement C1q like 4)

Identity

Alias_namescomplement component 1
Alias_symbol (synonym)C1QTNF11
CTRP11
Other alias
HGNC (Hugo) C1QL4
LocusID (NCBI) 338761
Atlas_Id 56071
Location 12q13.12  [Link to chromosome band 12q13]
Location_base_pair Starts at 49332417 and ends at 49337188 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)C1QL4   31416
Cards
Entrez_Gene (NCBI)C1QL4  338761  complement C1q like 4
AliasesC1QTNF11; CTRP11
GeneCards (Weizmann)C1QL4
Ensembl hg19 (Hinxton)ENSG00000186897 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000186897 [Gene_View]  chr12:49332417-49337188 [Contig_View]  C1QL4 [Vega]
ICGC DataPortalENSG00000186897
TCGA cBioPortalC1QL4
AceView (NCBI)C1QL4
Genatlas (Paris)C1QL4
WikiGenes338761
SOURCE (Princeton)C1QL4
Genetics Home Reference (NIH)C1QL4
Genomic and cartography
GoldenPath hg38 (UCSC)C1QL4  -     chr12:49332417-49337188 -  12q13.12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)C1QL4  -     12q13.12   [Description]    (hg19-Feb_2009)
EnsemblC1QL4 - 12q13.12 [CytoView hg19]  C1QL4 - 12q13.12 [CytoView hg38]
Mapping of homologs : NCBIC1QL4 [Mapview hg19]  C1QL4 [Mapview hg38]
OMIM615229   
Gene and transcription
Genbank (Entrez)AF466366 BC110812
RefSeq transcript (Entrez)NM_001008223
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)C1QL4
Cluster EST : UnigeneHs.380386 [ NCBI ]
CGAP (NCI)Hs.380386
Alternative Splicing GalleryENSG00000186897
Gene ExpressionC1QL4 [ NCBI-GEO ]   C1QL4 [ EBI - ARRAY_EXPRESS ]   C1QL4 [ SEEK ]   C1QL4 [ MEM ]
Gene Expression Viewer (FireBrowse)C1QL4 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)338761
GTEX Portal (Tissue expression)C1QL4
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ86Z23   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ86Z23  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ86Z23
Splice isoforms : SwissVarQ86Z23
PhosPhoSitePlusQ86Z23
Domaine pattern : Prosite (Expaxy)C1Q (PS50871)   
Domains : Interpro (EBI)C1q_dom    Tumour_necrosis_fac-like_dom   
Domain families : Pfam (Sanger)C1q (PF00386)   
Domain families : Pfam (NCBI)pfam00386   
Domain families : Smart (EMBL)C1Q (SM00110)  
Conserved Domain (NCBI)C1QL4
DMDM Disease mutations338761
Blocks (Seattle)C1QL4
SuperfamilyQ86Z23
Human Protein AtlasENSG00000186897
Peptide AtlasQ86Z23
HPRD17350
IPIIPI00241806   
Protein Interaction databases
DIP (DOE-UCLA)Q86Z23
IntAct (EBI)Q86Z23
FunCoupENSG00000186897
BioGRIDC1QL4
STRING (EMBL)C1QL4
ZODIACC1QL4
Ontologies - Pathways
QuickGOQ86Z23
Ontology : AmiGOcollagen trimer  extracellular space  identical protein binding  negative regulation of fat cell differentiation  negative regulation of fibroblast proliferation  negative regulation of ERK1 and ERK2 cascade  
Ontology : EGO-EBIcollagen trimer  extracellular space  identical protein binding  negative regulation of fat cell differentiation  negative regulation of fibroblast proliferation  negative regulation of ERK1 and ERK2 cascade  
NDEx NetworkC1QL4
Atlas of Cancer Signalling NetworkC1QL4
Wikipedia pathwaysC1QL4
Orthology - Evolution
OrthoDB338761
GeneTree (enSembl)ENSG00000186897
Phylogenetic Trees/Animal Genes : TreeFamC1QL4
HOVERGENQ86Z23
HOGENOMQ86Z23
Homologs : HomoloGeneC1QL4
Homology/Alignments : Family Browser (UCSC)C1QL4
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerC1QL4 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)C1QL4
dbVarC1QL4
ClinVarC1QL4
1000_GenomesC1QL4 
Exome Variant ServerC1QL4
ExAC (Exome Aggregation Consortium)C1QL4 (select the gene name)
Genetic variants : HAPMAP338761
Genomic Variants (DGV)C1QL4 [DGVbeta]
DECIPHERC1QL4 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisC1QL4 
Mutations
ICGC Data PortalC1QL4 
TCGA Data PortalC1QL4 
Broad Tumor PortalC1QL4
OASIS PortalC1QL4 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICC1QL4  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDC1QL4
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch C1QL4
DgiDB (Drug Gene Interaction Database)C1QL4
DoCM (Curated mutations)C1QL4 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)C1QL4 (select a term)
intoGenC1QL4
Cancer3DC1QL4(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM615229   
Orphanet
MedgenC1QL4
Genetic Testing Registry C1QL4
NextProtQ86Z23 [Medical]
TSGene338761
GENETestsC1QL4
Target ValidationC1QL4
Huge Navigator C1QL4 [HugePedia]
snp3D : Map Gene to Disease338761
BioCentury BCIQC1QL4
ClinGenC1QL4
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD338761
Chemical/Pharm GKB GenePA142672536
Clinical trialC1QL4
Miscellaneous
canSAR (ICR)C1QL4 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineC1QL4
EVEXC1QL4
GoPubMedC1QL4
iHOPC1QL4
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 12:26:06 CEST 2017

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