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C1QTNF7 (C1q and TNF related 7)

Identity

Alias_symbol (synonym)CTRP7
Other aliasZACRP7
HGNC (Hugo) C1QTNF7
LocusID (NCBI) 114905
Atlas_Id 879
Location 4p15.32  [Link to chromosome band 4p15]
Location_base_pair Starts at 15339936 and ends at 15446167 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)C1QTNF7   14342
Cards
Entrez_Gene (NCBI)C1QTNF7  114905  C1q and TNF related 7
AliasesCTRP7; ZACRP7
GeneCards (Weizmann)C1QTNF7
Ensembl hg19 (Hinxton)ENSG00000163145 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000163145 [Gene_View]  chr4:15339936-15446167 [Contig_View]  C1QTNF7 [Vega]
ICGC DataPortalENSG00000163145
TCGA cBioPortalC1QTNF7
AceView (NCBI)C1QTNF7
Genatlas (Paris)C1QTNF7
WikiGenes114905
SOURCE (Princeton)C1QTNF7
Genetics Home Reference (NIH)C1QTNF7
Genomic and cartography
GoldenPath hg38 (UCSC)C1QTNF7  -     chr4:15339936-15446167 +  4p15.32   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)C1QTNF7  -     4p15.32   [Description]    (hg19-Feb_2009)
EnsemblC1QTNF7 - 4p15.32 [CytoView hg19]  C1QTNF7 - 4p15.32 [CytoView hg38]
Mapping of homologs : NCBIC1QTNF7 [Mapview hg19]  C1QTNF7 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF329839 AK314802 BC022187 BC024015 BE856929
RefSeq transcript (Entrez)NM_001135170 NM_001135171 NM_031911
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)C1QTNF7
Cluster EST : UnigeneHs.153714 [ NCBI ]
CGAP (NCI)Hs.153714
Alternative Splicing GalleryENSG00000163145
Gene ExpressionC1QTNF7 [ NCBI-GEO ]   C1QTNF7 [ EBI - ARRAY_EXPRESS ]   C1QTNF7 [ SEEK ]   C1QTNF7 [ MEM ]
Gene Expression Viewer (FireBrowse)C1QTNF7 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)114905
GTEX Portal (Tissue expression)C1QTNF7
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9BXJ2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9BXJ2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9BXJ2
Splice isoforms : SwissVarQ9BXJ2
PhosPhoSitePlusQ9BXJ2
Domaine pattern : Prosite (Expaxy)C1Q (PS50871)   
Domains : Interpro (EBI)C1q_dom    Collagen    Tumour_necrosis_fac-like_dom   
Domain families : Pfam (Sanger)C1q (PF00386)    Collagen (PF01391)   
Domain families : Pfam (NCBI)pfam00386    pfam01391   
Domain families : Smart (EMBL)C1Q (SM00110)  
Conserved Domain (NCBI)C1QTNF7
DMDM Disease mutations114905
Blocks (Seattle)C1QTNF7
SuperfamilyQ9BXJ2
Human Protein AtlasENSG00000163145
Peptide AtlasQ9BXJ2
HPRD16633
IPIIPI00784310   IPI00913995   IPI00967960   IPI00964693   
Protein Interaction databases
DIP (DOE-UCLA)Q9BXJ2
IntAct (EBI)Q9BXJ2
FunCoupENSG00000163145
BioGRIDC1QTNF7
STRING (EMBL)C1QTNF7
ZODIACC1QTNF7
Ontologies - Pathways
QuickGOQ9BXJ2
Ontology : AmiGOextracellular region  collagen trimer  
Ontology : EGO-EBIextracellular region  collagen trimer  
NDEx NetworkC1QTNF7
Atlas of Cancer Signalling NetworkC1QTNF7
Wikipedia pathwaysC1QTNF7
Orthology - Evolution
OrthoDB114905
GeneTree (enSembl)ENSG00000163145
Phylogenetic Trees/Animal Genes : TreeFamC1QTNF7
HOVERGENQ9BXJ2
HOGENOMQ9BXJ2
Homologs : HomoloGeneC1QTNF7
Homology/Alignments : Family Browser (UCSC)C1QTNF7
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerC1QTNF7 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)C1QTNF7
dbVarC1QTNF7
ClinVarC1QTNF7
1000_GenomesC1QTNF7 
Exome Variant ServerC1QTNF7
ExAC (Exome Aggregation Consortium)C1QTNF7 (select the gene name)
Genetic variants : HAPMAP114905
Genomic Variants (DGV)C1QTNF7 [DGVbeta]
DECIPHERC1QTNF7 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisC1QTNF7 
Mutations
ICGC Data PortalC1QTNF7 
TCGA Data PortalC1QTNF7 
Broad Tumor PortalC1QTNF7
OASIS PortalC1QTNF7 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICC1QTNF7  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDC1QTNF7
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch C1QTNF7
DgiDB (Drug Gene Interaction Database)C1QTNF7
DoCM (Curated mutations)C1QTNF7 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)C1QTNF7 (select a term)
intoGenC1QTNF7
Cancer3DC1QTNF7(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenC1QTNF7
Genetic Testing Registry C1QTNF7
NextProtQ9BXJ2 [Medical]
TSGene114905
GENETestsC1QTNF7
Target ValidationC1QTNF7
Huge Navigator C1QTNF7 [HugePedia]
snp3D : Map Gene to Disease114905
BioCentury BCIQC1QTNF7
ClinGenC1QTNF7
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD114905
Chemical/Pharm GKB GenePA25634
Clinical trialC1QTNF7
Miscellaneous
canSAR (ICR)C1QTNF7 (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineC1QTNF7
EVEXC1QTNF7
GoPubMedC1QTNF7
iHOPC1QTNF7
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Tue Aug 1 16:56:28 CEST 2017

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