Atlas of Genetics and Cytogenetics in Oncology and Haematology


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C1orf137 (chromosome 1 open reading frame 137)

Identity

Other alias-
HGNC (Hugo) C1orf137
LocusID (NCBI) 388667
Atlas_Id 61057
Location 1p13.1  [Link to chromosome band 1p13]
Location_base_pair Starts at 116694112 and ends at 116706603 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)C1orf137   32040
Cards
Entrez_Gene (NCBI)C1orf137  388667  chromosome 1 open reading frame 137
Aliases
GeneCards (Weizmann)C1orf137
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr1:116694112-116706603 [Contig_View]  C1orf137 [Vega]
TCGA cBioPortalC1orf137
AceView (NCBI)C1orf137
Genatlas (Paris)C1orf137
WikiGenes388667
SOURCE (Princeton)C1orf137
Genetics Home Reference (NIH)C1orf137
Genomic and cartography
GoldenPath hg38 (UCSC)C1orf137  -     chr1:116694112-116706603 +  1p13.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)C1orf137  -     1p13.1   [Description]    (hg19-Feb_2009)
EnsemblC1orf137 - 1p13.1 [CytoView hg19]  C1orf137 - 1p13.1 [CytoView hg38]
Mapping of homologs : NCBIC1orf137 [Mapview hg19]  C1orf137 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA922397
RefSeq transcript (Entrez)NM_001013643
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)C1orf137
Cluster EST : UnigeneHs.127851 [ NCBI ]
CGAP (NCI)Hs.127851
Gene ExpressionC1orf137 [ NCBI-GEO ]   C1orf137 [ EBI - ARRAY_EXPRESS ]   C1orf137 [ SEEK ]   C1orf137 [ MEM ]
Gene Expression Viewer (FireBrowse)C1orf137 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)388667
GTEX Portal (Tissue expression)C1orf137
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ5JT78   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ5JT78  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ5JT78
Splice isoforms : SwissVarQ5JT78
PhosPhoSitePlusQ5JT78
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)C1orf137
DMDM Disease mutations388667
Blocks (Seattle)C1orf137
SuperfamilyQ5JT78
Peptide AtlasQ5JT78
HPRD18385
IPIIPI00374766   
Protein Interaction databases
DIP (DOE-UCLA)Q5JT78
IntAct (EBI)Q5JT78
BioGRIDC1orf137
STRING (EMBL)C1orf137
ZODIACC1orf137
Ontologies - Pathways
QuickGOQ5JT78
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkC1orf137
Atlas of Cancer Signalling NetworkC1orf137
Wikipedia pathwaysC1orf137
Orthology - Evolution
OrthoDB388667
Phylogenetic Trees/Animal Genes : TreeFamC1orf137
HOVERGENQ5JT78
HOGENOMQ5JT78
Homologs : HomoloGeneC1orf137
Homology/Alignments : Family Browser (UCSC)C1orf137
Gene fusions - Rearrangements
Fusion: Tumor Portal C1orf137
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerC1orf137 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)C1orf137
dbVarC1orf137
ClinVarC1orf137
1000_GenomesC1orf137 
Exome Variant ServerC1orf137
ExAC (Exome Aggregation Consortium)
Genetic variants : HAPMAP388667
Genomic Variants (DGV)C1orf137 [DGVbeta]
DECIPHERC1orf137 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisC1orf137 
Mutations
ICGC Data PortalC1orf137 
TCGA Data PortalC1orf137 
Broad Tumor PortalC1orf137
OASIS PortalC1orf137 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICC1orf137  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDC1orf137
BioMutasearch C1orf137
DgiDB (Drug Gene Interaction Database)C1orf137
DoCM (Curated mutations)C1orf137 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)C1orf137 (select a term)
intoGenC1orf137
Cancer3DC1orf137(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenC1orf137
Genetic Testing Registry C1orf137
NextProtQ5JT78 [Medical]
TSGene388667
GENETestsC1orf137
Target ValidationC1orf137
Huge Navigator C1orf137 [HugePedia]
snp3D : Map Gene to Disease388667
BioCentury BCIQC1orf137
ClinGenC1orf137
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD388667
Chemical/Pharm GKB GenePA142672455
Clinical trialC1orf137
Miscellaneous
canSAR (ICR)C1orf137 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineC1orf137
EVEXC1orf137
GoPubMedC1orf137
iHOPC1orf137
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 11:40:06 CET 2017

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