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C1orf143 (chromosome 1 open reading frame 143)

Identity

Other alias-
HGNC (Hugo) C1orf143
LocusID (NCBI) 440714
Atlas_Id 79832
Location 1q41  [Link to chromosome band 1q41]
Location_base_pair Starts at 218510095 and ends at 218525978 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)C1orf143   32045
Cards
Entrez_Gene (NCBI)C1orf143  440714  chromosome 1 open reading frame 143
Aliases
GeneCards (Weizmann)C1orf143
Ensembl hg19 (Hinxton)ENSG00000228208 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000228208 [Gene_View]  chr1:218510095-218525978 [Contig_View]  C1orf143 [Vega]
ICGC DataPortalENSG00000228208
TCGA cBioPortalC1orf143
AceView (NCBI)C1orf143
Genatlas (Paris)C1orf143
WikiGenes440714
SOURCE (Princeton)C1orf143
Genetics Home Reference (NIH)C1orf143
Genomic and cartography
GoldenPath hg38 (UCSC)C1orf143  -     chr1:218510095-218525978 +  1q41   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)C1orf143  -     1q41   [Description]    (hg19-Feb_2009)
EnsemblC1orf143 - 1q41 [CytoView hg19]  C1orf143 - 1q41 [CytoView hg38]
Mapping of homologs : NCBIC1orf143 [Mapview hg19]  C1orf143 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI148415 BG219097 BX090916
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)C1orf143
Cluster EST : UnigeneHs.639504 [ NCBI ]
CGAP (NCI)Hs.639504
Alternative Splicing GalleryENSG00000228208
Gene ExpressionC1orf143 [ NCBI-GEO ]   C1orf143 [ EBI - ARRAY_EXPRESS ]   C1orf143 [ SEEK ]   C1orf143 [ MEM ]
Gene Expression Viewer (FireBrowse)C1orf143 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)440714
GTEX Portal (Tissue expression)C1orf143
Human Protein AtlasENSG00000228208-C1orf143 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)C1orf143
DMDM Disease mutations440714
Blocks (Seattle)C1orf143
Human Protein Atlas [tissue]ENSG00000228208-C1orf143 [tissue]
Protein Interaction databases
FunCoupENSG00000228208
BioGRIDC1orf143
STRING (EMBL)C1orf143
ZODIACC1orf143
Ontologies - Pathways
Huge Navigator C1orf143 [HugePedia]
snp3D : Map Gene to Disease440714
BioCentury BCIQC1orf143
ClinGenC1orf143
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD440714
Chemical/Pharm GKB GenePA142672460
Clinical trialC1orf143
Miscellaneous
canSAR (ICR)C1orf143 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineC1orf143
EVEXC1orf143
GoPubMedC1orf143
iHOPC1orf143
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Nov 20 19:21:12 CET 2017

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