Atlas of Genetics and Cytogenetics in Oncology and Haematology


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C1orf145 (chromosome 1 open reading frame 145)

Identity

Alias_symbol (synonym)FLJ31994
Other alias-
HGNC (Hugo) C1orf145
LocusID (NCBI) 574407
Atlas_Id 61060
Location 1q42.13  [Link to chromosome band 1q42]
Location_base_pair Starts at 228392176 and ends at 228401365 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)C1orf145   32047
Cards
Entrez_Gene (NCBI)C1orf145  574407  chromosome 1 open reading frame 145
Aliases
GeneCards (Weizmann)C1orf145
Ensembl hg19 (Hinxton)ENSG00000162913 [Gene_View]  chr1:228392176-228401365 [Contig_View]  C1orf145 [Vega]
Ensembl hg38 (Hinxton)ENSG00000162913 [Gene_View]  chr1:228392176-228401365 [Contig_View]  C1orf145 [Vega]
ICGC DataPortalENSG00000162913
TCGA cBioPortalC1orf145
AceView (NCBI)C1orf145
Genatlas (Paris)C1orf145
WikiGenes574407
SOURCE (Princeton)C1orf145
Genetics Home Reference (NIH)C1orf145
Genomic and cartography
GoldenPath hg19 (UCSC)C1orf145  -     chr1:228392176-228401365 -  1q42.13   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)C1orf145  -     1q42.13   [Description]    (hg38-Dec_2013)
EnsemblC1orf145 - 1q42.13 [CytoView hg19]  C1orf145 - 1q42.13 [CytoView hg38]
Mapping of homologs : NCBIC1orf145 [Mapview hg19]  C1orf145 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK056556 BC027909
RefSeq transcript (Entrez)NM_001025495
RefSeq genomic (Entrez)NC_000001 NC_018912 NT_167186 NW_004929294
Consensus coding sequences : CCDS (NCBI)C1orf145
Cluster EST : UnigeneHs.650039 [ NCBI ]
CGAP (NCI)Hs.650039
Alternative Splicing GalleryENSG00000162913
Gene ExpressionC1orf145 [ NCBI-GEO ]   C1orf145 [ EBI - ARRAY_EXPRESS ]   C1orf145 [ SEEK ]   C1orf145 [ MEM ]
Gene Expression Viewer (FireBrowse)C1orf145 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)574407
GTEX Portal (Tissue expression)C1orf145
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96MR7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96MR7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96MR7
Splice isoforms : SwissVarQ96MR7
PhosPhoSitePlusQ96MR7
Domains : Interpro (EBI)DUF4608   
Domain families : Pfam (Sanger)DUF4608 (PF15381)   
Domain families : Pfam (NCBI)pfam15381   
Conserved Domain (NCBI)C1orf145
DMDM Disease mutations574407
Blocks (Seattle)C1orf145
SuperfamilyQ96MR7
Human Protein AtlasENSG00000162913
Peptide AtlasQ96MR7
IPIIPI00043304   IPI00166503   IPI00981483   
Protein Interaction databases
DIP (DOE-UCLA)Q96MR7
IntAct (EBI)Q96MR7
FunCoupENSG00000162913
BioGRIDC1orf145
STRING (EMBL)C1orf145
ZODIACC1orf145
Ontologies - Pathways
QuickGOQ96MR7
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkC1orf145
Atlas of Cancer Signalling NetworkC1orf145
Wikipedia pathwaysC1orf145
Orthology - Evolution
OrthoDB574407
GeneTree (enSembl)ENSG00000162913
Phylogenetic Trees/Animal Genes : TreeFamC1orf145
HOVERGENQ96MR7
HOGENOMQ96MR7
Homologs : HomoloGeneC1orf145
Homology/Alignments : Family Browser (UCSC)C1orf145
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerC1orf145 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)C1orf145
dbVarC1orf145
ClinVarC1orf145
1000_GenomesC1orf145 
Exome Variant ServerC1orf145
ExAC (Exome Aggregation Consortium)C1orf145 (select the gene name)
Genetic variants : HAPMAP574407
Genomic Variants (DGV)C1orf145 [DGVbeta]
DECIPHER (Syndromes)1:228392176-228401365  ENSG00000162913
CONAN: Copy Number AnalysisC1orf145 
Mutations
ICGC Data PortalC1orf145 
TCGA Data PortalC1orf145 
Broad Tumor PortalC1orf145
OASIS PortalC1orf145 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDC1orf145
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch C1orf145
DgiDB (Drug Gene Interaction Database)C1orf145
DoCM (Curated mutations)C1orf145 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)C1orf145 (select a term)
intoGenC1orf145
Cancer3DC1orf145(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenC1orf145
Genetic Testing Registry C1orf145
NextProtQ96MR7 [Medical]
TSGene574407
GENETestsC1orf145
Huge Navigator C1orf145 [HugePedia]
snp3D : Map Gene to Disease574407
BioCentury BCIQC1orf145
ClinGenC1orf145
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD574407
Chemical/Pharm GKB GenePA142672462
Clinical trialC1orf145
Miscellaneous
canSAR (ICR)C1orf145 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineC1orf145
EVEXC1orf145
GoPubMedC1orf145
iHOPC1orf145
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 11:56:56 CET 2017

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