Atlas of Genetics and Cytogenetics in Oncology and Haematology


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C1orf147 (chromosome 1 open reading frame 147)

Identity

Alias_symbol (synonym)FLJ32597
Other alias-
HGNC (Hugo) C1orf147
LocusID (NCBI) 574431
Atlas_Id 61062
Location 1q32.1  [Link to chromosome band 1q32]
Location_base_pair Starts at 206491116 and ends at 206497728 bp from pter ( according to hg38-Dec_2013)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)C1orf147   32061
Cards
Entrez_Gene (NCBI)C1orf147  574431  chromosome 1 open reading frame 147
Aliases
GeneCards (Weizmann)C1orf147
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr1:206491116-206497728 [Contig_View]  C1orf147 [Vega]
TCGA cBioPortalC1orf147
AceView (NCBI)C1orf147
Genatlas (Paris)C1orf147
WikiGenes574431
SOURCE (Princeton)C1orf147
Genetics Home Reference (NIH)C1orf147
Genomic and cartography
GoldenPath hg38 (UCSC)C1orf147  -     chr1:206491116-206497728 -  1q32.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)C1orf147  -     1q32.1   [Description]    (hg19-Feb_2009)
EnsemblC1orf147 - 1q32.1 [CytoView hg19]  C1orf147 - 1q32.1 [CytoView hg38]
Mapping of homologs : NCBIC1orf147 [Mapview hg19]  C1orf147 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK057159
RefSeq transcript (Entrez)NM_001025592
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)C1orf147
Cluster EST : UnigeneHs.321045 [ NCBI ]
CGAP (NCI)Hs.321045
Gene ExpressionC1orf147 [ NCBI-GEO ]   C1orf147 [ EBI - ARRAY_EXPRESS ]   C1orf147 [ SEEK ]   C1orf147 [ MEM ]
Gene Expression Viewer (FireBrowse)C1orf147 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)574431
GTEX Portal (Tissue expression)C1orf147
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96MC9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96MC9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96MC9
Splice isoforms : SwissVarQ96MC9
PhosPhoSitePlusQ96MC9
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)C1orf147
DMDM Disease mutations574431
Blocks (Seattle)C1orf147
SuperfamilyQ96MC9
Peptide AtlasQ96MC9
IPIIPI00307657   
Protein Interaction databases
DIP (DOE-UCLA)Q96MC9
IntAct (EBI)Q96MC9
BioGRIDC1orf147
STRING (EMBL)C1orf147
ZODIACC1orf147
Ontologies - Pathways
QuickGOQ96MC9
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkC1orf147
Atlas of Cancer Signalling NetworkC1orf147
Wikipedia pathwaysC1orf147
Orthology - Evolution
OrthoDB574431
Phylogenetic Trees/Animal Genes : TreeFamC1orf147
HOVERGENQ96MC9
HOGENOMQ96MC9
Homologs : HomoloGeneC1orf147
Homology/Alignments : Family Browser (UCSC)C1orf147
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerC1orf147 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)C1orf147
dbVarC1orf147
ClinVarC1orf147
1000_GenomesC1orf147 
Exome Variant ServerC1orf147
ExAC (Exome Aggregation Consortium)C1orf147 (select the gene name)
Genetic variants : HAPMAP574431
Genomic Variants (DGV)C1orf147 [DGVbeta]
DECIPHERC1orf147 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisC1orf147 
Mutations
ICGC Data PortalC1orf147 
TCGA Data PortalC1orf147 
Broad Tumor PortalC1orf147
OASIS PortalC1orf147 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICC1orf147  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDC1orf147
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch C1orf147
DgiDB (Drug Gene Interaction Database)C1orf147
DoCM (Curated mutations)C1orf147 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)C1orf147 (select a term)
intoGenC1orf147
Cancer3DC1orf147(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenC1orf147
Genetic Testing Registry C1orf147
NextProtQ96MC9 [Medical]
TSGene574431
GENETestsC1orf147
Target ValidationC1orf147
Huge Navigator C1orf147 [HugePedia]
snp3D : Map Gene to Disease574431
BioCentury BCIQC1orf147
ClinGenC1orf147
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD574431
Chemical/Pharm GKB GenePA142672464
Clinical trialC1orf147
Miscellaneous
canSAR (ICR)C1orf147 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineC1orf147
EVEXC1orf147
GoPubMedC1orf147
iHOPC1orf147
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:03:03 CEST 2017

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