Atlas of Genetics and Cytogenetics in Oncology and Haematology


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C1orf159 (chromosome 1 open reading frame 159)

Identity

Other names-
HGNC (Hugo) C1orf159
LocusID (NCBI) 54991
Location 1p36.33
Location_base_pair Starts at 1017198 and ends at 1051736 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)C1orf159   26062
Cards
Entrez_Gene (NCBI)C1orf159  54991  chromosome 1 open reading frame 159
GeneCards (Weizmann)C1orf159
Ensembl (Hinxton)ENSG00000131591 [Gene_View]  chr1:1017198-1051736 [Contig_View]  C1orf159 [Vega]
AceView (NCBI)C1orf159
Genatlas (Paris)C1orf159
WikiGenes54991
SOURCE (Princeton)NM_017891
Genomic and cartography
GoldenPath (UCSC)C1orf159  -  1p36.33   chr1:1017198-1051736 -  1p36.33   [Description]    (hg19-Feb_2009)
EnsemblC1orf159 - 1p36.33 [CytoView]
Mapping of homologs : NCBIC1orf159 [Mapview]
Gene and transcription
Genbank (Entrez)AI270164 AK000591 AK024796 AK054793 AK057368
RefSeq transcript (Entrez)NM_017891
RefSeq genomic (Entrez)AC_000133 NC_000001 NC_018912 NT_004350 NW_001838585 NW_004929288
Consensus coding sequences : CCDS (NCBI)C1orf159
Cluster EST : UnigeneHs.235095 [ NCBI ]
CGAP (NCI)Hs.235095
Alternative Splicing : Fast-db (Paris)GSHG0001648
Alternative Splicing GalleryENSG00000131591
Gene ExpressionC1orf159 [ NCBI-GEO ]     C1orf159 [ SEEK ]   C1orf159 [ MEM ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96HA4 (Uniprot)
NextProtQ96HA4  [Medical]
With graphics : InterProQ96HA4
Splice isoforms : SwissVarQ96HA4 (Swissvar)
Domains : Interpro (EBI)DUF4501   
Related proteins : CluSTrQ96HA4
Domain families : Pfam (Sanger)DUF4501 (PF14946)   
Domain families : Pfam (NCBI)pfam14946   
DMDM Disease mutations54991
Blocks (Seattle)Q96HA4
Human Protein AtlasENSG00000131591
Peptide AtlasQ96HA4
HPRD07930
IPIIPI00515131   IPI00062955   IPI00514936   IPI00016627   IPI00909677   IPI00871670   IPI00916675   IPI00446467   IPI00883596   
Protein Interaction databases
DIP (DOE-UCLA)Q96HA4
IntAct (EBI)Q96HA4
FunCoupENSG00000131591
BioGRIDC1orf159
InParanoidQ96HA4
Interologous Interaction database Q96HA4
IntegromeDBC1orf159
STRING (EMBL)C1orf159
Ontologies - Pathways
Ontology : AmiGOintegral to membrane  
Ontology : EGO-EBIintegral to membrane  
REACTOMEC1orf159
Protein Interaction DatabaseC1orf159
Wikipedia pathwaysC1orf159
Gene fusion - rearrangments
Polymorphisms : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)C1orf159
SNP (GeneSNP Utah)C1orf159
SNP : HGBaseC1orf159
Genetic variants : HAPMAPC1orf159
1000_GenomesC1orf159 
ICGC programENSG00000131591 
Somatic Mutations in Cancer : COSMICC1orf159 
CONAN: Copy Number AnalysisC1orf159 
Mutations and Diseases : HGMDC1orf159
OMIM
GENETestsC1orf159
Disease Genetic AssociationC1orf159
Huge Navigator C1orf159 [HugePedia]  C1orf159 [HugeCancerGEM]
Genomic VariantsC1orf159  C1orf159 [DGVbeta]
Exome VariantC1orf159
dbVarC1orf159
ClinVarC1orf159
snp3D : Map Gene to Disease54991
General knowledge
Homologs : HomoloGeneC1orf159
Homology/Alignments : Family Browser (UCSC)C1orf159
Phylogenetic Trees/Animal Genes : TreeFamC1orf159
Chemical/Protein Interactions : CTD54991
Chemical/Pharm GKB GenePA142672410
Clinical trialC1orf159
Cancer Resource (Charite)ENSG00000131591
Other databases
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
CoreMineC1orf159
iHOPC1orf159
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated12-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri Apr 18 16:58:18 CEST 2014

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