Atlas of Genetics and Cytogenetics in Oncology and Haematology

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C1orf159 (chromosome 1 open reading frame 159)

Identity

Other names-
HGNC (Hugo) C1orf159
LocusID (NCBI) 54991
Location 1p36.33
Location_base_pair Starts at 1017198 and ends at 1051736 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)C1orf159   26062
Entrez_Gene (NCBI)C1orf159  54991  chromosome 1 open reading frame 159
Cards
GeneCards (Weizmann)C1orf159
Ensembl (Hinxton)ENSG00000131591 [Gene_View]  chr1:1017198-1051736 [Contig_View]  C1orf159 [Vega]
AceView (NCBI)C1orf159
Genatlas (Paris)C1orf159
SOURCE (Stanford)NM_017891
Genomic and cartography
GoldenPath (UCSC)C1orf159  -  1p36.33   chr1:1017198-1051736 -  1p36.33   [Description]    (hg19-Feb_2009)
EnsemblC1orf159 - 1p36.33 [CytoView]
Mapping of homologs : NCBIC1orf159 [Mapview]
Gene and transcription
Genbank (Entrez)AI270164 AK000591 AK024796 AK054793 AK057368
RefSeq transcript (SRS)NM_017891
RefSeq transcript (Entrez)NM_017891
RefSeq genomic (SRS)AC_000133 NC_000001 NC_018912 NT_004350 NW_001838585 NW_004077988
RefSeq genomic (Entrez)AC_000133 NC_000001 NC_018912 NT_004350 NW_001838585 NW_004077988
Consensus coding sequences : CCDS (NCBI)C1orf159
Cluster EST : UnigeneHs.235095 [ SRS ] Hs.235095 [ NCBI ]
CGAP (NCI)Hs.235095
Alternative Splicing : Fast-db (Paris)GSHG0001648
Alternative Splicing GalleryENSG00000131591
Gene ExpressionC1orf159 [ NCBI-GEO ]   C1orf159 [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96HA4 (SRS) Q96HA4 (Uniprot)
NextProtQ96HA4
With graphics : InterProQ96HA4
Splice isoforms : SwissVarQ96HA4(Swissvar)
Related proteins : CluSTrQ96HA4
Domain families : Pfam (SRS)
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
DMDM54991
Blocks (Seattle)Q96HA4
Human Protein AtlasENSG00000131591
HPRD07930
IPIIPI00515131   IPI00062955   IPI00514936   IPI00016627   IPI00909677   IPI00871670   IPI00916675   IPI00446467   IPI00883596   
Protein Interaction databases
DIP (DOE-UCLA)Q96HA4
IntAct (EBI)Q96HA4
FunCoupENSG00000131591
REACTOMEC1orf159
Protein Interaction Database54991
BioGRIDC1orf159
InParanoidQ96HA4
Interologous Interaction database Q96HA4
IntegromeDBC1orf159
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)C1orf159
SNP (GeneSNP Utah)C1orf159
SNP : HGBaseC1orf159
Genetic variants : HAPMAPC1orf159
Somatic Mutations in Cancer : COSMICC1orf159 
CONAN: Copy Number AnalysisC1orf159 
Mutations and Diseases : HGMDC1orf159
OMIM
GENETests
Disease Genetic AssociationC1orf159
Huge Navigator C1orf159 [HugePedia]  C1orf159 [HugeCancerGEM]
Genomic VariantsC1orf159  C1orf159 [DGVbeta]
snp3D : Map Gene to Disease54991
General knowledge
Homologs : HomoloGeneC1orf159
Homology/Alignments : Family Browser (UCSC)C1orf159
Phylogenetic Trees/Animal Genes : TreeFamC1orf159
Chemical/Protein Interactions : CTD54991
Chemical/Pharm GKB GenePA142672410
Clinical trialC1orf159
Cancer Resource (Charite)ENSG00000131591
Ontology : AmiGOintegral to membrane  
Ontology : EGO-EBIintegral to membrane  
Other databases
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
PubGeneC1orf159
iHOPC1orf159
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated01-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 1 12:33:41 CEST 2013
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