Atlas of Genetics and Cytogenetics in Oncology and Haematology


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C1orf195 (chromosome 1 open reading frame 195)

Identity

Other alias-
HGNC (Hugo) C1orf195
LocusID (NCBI) 727684
Atlas_Id 61073
Location 1p36.21  [Link to chromosome band 1p36]
Location_base_pair Starts at 15168474 and ends at 15171624 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)C1orf195   32332
Cards
Entrez_Gene (NCBI)C1orf195  727684  chromosome 1 open reading frame 195
Aliases
GeneCards (Weizmann)C1orf195
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr1:15168474-15171624 [Contig_View]  C1orf195 [Vega]
TCGA cBioPortalC1orf195
AceView (NCBI)C1orf195
Genatlas (Paris)C1orf195
WikiGenes727684
SOURCE (Princeton)C1orf195
Genetics Home Reference (NIH)C1orf195
Genomic and cartography
GoldenPath hg38 (UCSC)C1orf195  -     chr1:15168474-15171624 -  1p36.21   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)C1orf195  -     1p36.21   [Description]    (hg19-Feb_2009)
EnsemblC1orf195 - 1p36.21 [CytoView hg19]  C1orf195 - 1p36.21 [CytoView hg38]
Mapping of homologs : NCBIC1orf195 [Mapview hg19]  C1orf195 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AW269992 BX095243
RefSeq transcript (Entrez)NM_001278501 NM_001278502
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)C1orf195
Cluster EST : UnigeneHs.735267 [ NCBI ]
CGAP (NCI)Hs.735267
Gene ExpressionC1orf195 [ NCBI-GEO ]   C1orf195 [ EBI - ARRAY_EXPRESS ]   C1orf195 [ SEEK ]   C1orf195 [ MEM ]
Gene Expression Viewer (FireBrowse)C1orf195 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)727684
GTEX Portal (Tissue expression)C1orf195
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ5TG92   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ5TG92  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ5TG92
Splice isoforms : SwissVarQ5TG92
PhosPhoSitePlusQ5TG92
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)C1orf195
DMDM Disease mutations727684
Blocks (Seattle)C1orf195
SuperfamilyQ5TG92
Peptide AtlasQ5TG92
IPIIPI00514335   IPI00889546   
Protein Interaction databases
DIP (DOE-UCLA)Q5TG92
IntAct (EBI)Q5TG92
BioGRIDC1orf195
STRING (EMBL)C1orf195
ZODIACC1orf195
Ontologies - Pathways
QuickGOQ5TG92
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkC1orf195
Atlas of Cancer Signalling NetworkC1orf195
Wikipedia pathwaysC1orf195
Orthology - Evolution
OrthoDB727684
Phylogenetic Trees/Animal Genes : TreeFamC1orf195
HOVERGENQ5TG92
HOGENOMQ5TG92
Homologs : HomoloGeneC1orf195
Homology/Alignments : Family Browser (UCSC)C1orf195
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerC1orf195 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)C1orf195
dbVarC1orf195
ClinVarC1orf195
1000_GenomesC1orf195 
Exome Variant ServerC1orf195
ExAC (Exome Aggregation Consortium)C1orf195 (select the gene name)
Genetic variants : HAPMAP727684
Genomic Variants (DGV)C1orf195 [DGVbeta]
DECIPHERC1orf195 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisC1orf195 
Mutations
ICGC Data PortalC1orf195 
TCGA Data PortalC1orf195 
Broad Tumor PortalC1orf195
OASIS PortalC1orf195 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICC1orf195  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDC1orf195
BioMutasearch C1orf195
DgiDB (Drug Gene Interaction Database)C1orf195
DoCM (Curated mutations)C1orf195 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)C1orf195 (select a term)
intoGenC1orf195
Cancer3DC1orf195(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenC1orf195
Genetic Testing Registry C1orf195
NextProtQ5TG92 [Medical]
TSGene727684
GENETestsC1orf195
Target ValidationC1orf195
Huge Navigator C1orf195 [HugePedia]
snp3D : Map Gene to Disease727684
BioCentury BCIQC1orf195
ClinGenC1orf195
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD727684
Chemical/Pharm GKB GenePA145149828
Clinical trialC1orf195
Miscellaneous
canSAR (ICR)C1orf195 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineC1orf195
EVEXC1orf195
GoPubMedC1orf195
iHOPC1orf195
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 15:40:52 CEST 2017

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