C1orf43 (chromosome 1 open reading frame 43)

2013-07-01  

Identity

HGNC
C1orf43
LOCATION
1q21.3
LOCUSID
25912
ALIAS
HSPC012,NICE-3,NICE3,NS5ATP4,S863-3
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 25912
MIM: 617428
HGNC: 29876
Ensembl: ENSG00000143612

Variants:

dbSNP: 25912
ClinVar: 25912
TCGA: ENSG00000143612
COSMIC: C1orf43

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000143612ENST00000350592Q9BWL3
ENSG00000143612ENST00000350592Q09GN0
ENSG00000143612ENST00000362076Q9BWL3
ENSG00000143612ENST00000368516X6R6F3
ENSG00000143612ENST00000368518Q9BWL3
ENSG00000143612ENST00000368519X6R6S3
ENSG00000143612ENST00000368521Q9BWL3
ENSG00000143612ENST00000470180A0A1W2PQS0
ENSG00000143612ENST00000640799A0A1W2PQP6
ENSG00000143612ENST00000648267A0A3B3IS96

Expression (GTEx)

0
50
100
150
200
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
231673442012Up-regulation of NICE-3 as a novel EDC gene could contribute to human hepatocellular carcinoma.0

Citation

Dessen P

C1orf43 (chromosome 1 open reading frame 43)

Atlas Genet Cytogenet Oncol Haematol. 2013-07-01

Online version: http://atlasgeneticsoncology.org/gene/53449/c1orf43