Atlas of Genetics and Cytogenetics in Oncology and Haematology


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C20orf203 (chromosome 20 open reading frame 203)

Identity

Alias_symbol (synonym)FLJ33706
Other alias-
HGNC (Hugo) C20orf203
LocusID (NCBI) 284805
Atlas_Id 61118
Location 20q11.21  [Link to chromosome band 20q11]
Location_base_pair Starts at 32631625 and ends at 32673941 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)C20orf203   26592
Cards
Entrez_Gene (NCBI)C20orf203  284805  chromosome 20 open reading frame 203
Aliases
GeneCards (Weizmann)C20orf203
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr20:32631625-32673941 [Contig_View]  C20orf203 [Vega]
TCGA cBioPortalC20orf203
AceView (NCBI)C20orf203
Genatlas (Paris)C20orf203
WikiGenes284805
SOURCE (Princeton)C20orf203
Genetics Home Reference (NIH)C20orf203
Genomic and cartography
GoldenPath hg38 (UCSC)C20orf203  -     chr20:32631625-32673941 -  20q11.21   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)C20orf203  -     20q11.21   [Description]    (hg19-Feb_2009)
EnsemblC20orf203 - 20q11.21 [CytoView hg19]  C20orf203 - 20q11.21 [CytoView hg38]
Mapping of homologs : NCBIC20orf203 [Mapview hg19]  C20orf203 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK091025 BC105014 BC105042 BM662904 BU736724
RefSeq transcript (Entrez)NM_182584
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)C20orf203
Cluster EST : UnigeneHs.353262 [ NCBI ]
CGAP (NCI)Hs.353262
Gene ExpressionC20orf203 [ NCBI-GEO ]   C20orf203 [ EBI - ARRAY_EXPRESS ]   C20orf203 [ SEEK ]   C20orf203 [ MEM ]
Gene Expression Viewer (FireBrowse)C20orf203 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)284805
GTEX Portal (Tissue expression)C20orf203
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NBC4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NBC4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NBC4
Splice isoforms : SwissVarQ8NBC4
PhosPhoSitePlusQ8NBC4
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)C20orf203
DMDM Disease mutations284805
Blocks (Seattle)C20orf203
SuperfamilyQ8NBC4
Peptide AtlasQ8NBC4
HPRD08164
IPIIPI00301016   
Protein Interaction databases
DIP (DOE-UCLA)Q8NBC4
IntAct (EBI)Q8NBC4
BioGRIDC20orf203
STRING (EMBL)C20orf203
ZODIACC20orf203
Ontologies - Pathways
QuickGOQ8NBC4
Ontology : AmiGOcytoplasm  
Ontology : EGO-EBIcytoplasm  
NDEx NetworkC20orf203
Atlas of Cancer Signalling NetworkC20orf203
Wikipedia pathwaysC20orf203
Orthology - Evolution
OrthoDB284805
Phylogenetic Trees/Animal Genes : TreeFamC20orf203
HOVERGENQ8NBC4
HOGENOMQ8NBC4
Homologs : HomoloGeneC20orf203
Homology/Alignments : Family Browser (UCSC)C20orf203
Gene fusions - Rearrangements
Fusion: Tumor Portal C20orf203
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerC20orf203 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)C20orf203
dbVarC20orf203
ClinVarC20orf203
1000_GenomesC20orf203 
Exome Variant ServerC20orf203
ExAC (Exome Aggregation Consortium)
Genetic variants : HAPMAP284805
Genomic Variants (DGV)C20orf203 [DGVbeta]
DECIPHERC20orf203 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisC20orf203 
Mutations
ICGC Data PortalC20orf203 
TCGA Data PortalC20orf203 
Broad Tumor PortalC20orf203
OASIS PortalC20orf203 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDC20orf203
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch C20orf203
DgiDB (Drug Gene Interaction Database)C20orf203
DoCM (Curated mutations)C20orf203 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)C20orf203 (select a term)
intoGenC20orf203
Cancer3DC20orf203(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenC20orf203
Genetic Testing Registry C20orf203
NextProtQ8NBC4 [Medical]
TSGene284805
GENETestsC20orf203
Target ValidationC20orf203
Huge Navigator C20orf203 [HugePedia]
snp3D : Map Gene to Disease284805
BioCentury BCIQC20orf203
ClinGenC20orf203
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD284805
Chemical/Pharm GKB GenePA165392347
Clinical trialC20orf203
Miscellaneous
canSAR (ICR)C20orf203 (select the gene name)
Probes
Litterature
PubMed11 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineC20orf203
EVEXC20orf203
GoPubMedC20orf203
iHOPC20orf203
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 11:40:19 CET 2017

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