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C22orf23 (chromosome 22 open reading frame 23)

Identity

Alias_symbol (synonym)FLJ32787
EVG1
LOC84645
Other aliasdJ1039K5.6
HGNC (Hugo) C22orf23
LocusID (NCBI) 84645
Atlas_Id 61133
Location 22q13.1  [Link to chromosome band 22q13]
Location_base_pair Starts at 37943050 and ends at 37953669 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
RPL28 (19q13.42) / C22orf23 (22q13.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)C22orf23   18589
Cards
Entrez_Gene (NCBI)C22orf23  84645  chromosome 22 open reading frame 23
AliasesEVG1; dJ1039K5.6
GeneCards (Weizmann)C22orf23
Ensembl hg19 (Hinxton)ENSG00000128346 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000128346 [Gene_View]  chr22:37943050-37953669 [Contig_View]  C22orf23 [Vega]
ICGC DataPortalENSG00000128346
TCGA cBioPortalC22orf23
AceView (NCBI)C22orf23
Genatlas (Paris)C22orf23
WikiGenes84645
SOURCE (Princeton)C22orf23
Genetics Home Reference (NIH)C22orf23
Genomic and cartography
GoldenPath hg38 (UCSC)C22orf23  -     chr22:37943050-37953669 -  22q13.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)C22orf23  -     22q13.1   [Description]    (hg19-Feb_2009)
EnsemblC22orf23 - 22q13.1 [CytoView hg19]  C22orf23 - 22q13.1 [CytoView hg38]
Mapping of homologs : NCBIC22orf23 [Mapview hg19]  C22orf23 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF324466 AK057349 BC031998 BI463610 BI827388
RefSeq transcript (Entrez)NM_001207062 NM_032561
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)C22orf23
Cluster EST : UnigeneHs.517612 [ NCBI ]
CGAP (NCI)Hs.517612
Alternative Splicing GalleryENSG00000128346
Gene ExpressionC22orf23 [ NCBI-GEO ]   C22orf23 [ EBI - ARRAY_EXPRESS ]   C22orf23 [ SEEK ]   C22orf23 [ MEM ]
Gene Expression Viewer (FireBrowse)C22orf23 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)84645
GTEX Portal (Tissue expression)C22orf23
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9BZE7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9BZE7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9BZE7
Splice isoforms : SwissVarQ9BZE7
PhosPhoSitePlusQ9BZE7
Domains : Interpro (EBI)UPF0193   
Domain families : Pfam (Sanger)UPF0193 (PF05250)   
Domain families : Pfam (NCBI)pfam05250   
Conserved Domain (NCBI)C22orf23
DMDM Disease mutations84645
Blocks (Seattle)C22orf23
SuperfamilyQ9BZE7
Human Protein AtlasENSG00000128346
Peptide AtlasQ9BZE7
HPRD12799
IPIIPI00289014   IPI00879502   IPI00879007   
Protein Interaction databases
DIP (DOE-UCLA)Q9BZE7
IntAct (EBI)Q9BZE7
FunCoupENSG00000128346
BioGRIDC22orf23
STRING (EMBL)C22orf23
ZODIACC22orf23
Ontologies - Pathways
QuickGOQ9BZE7
Ontology : AmiGOmolecular_function  protein binding  cellular_component  biological_process  
Ontology : EGO-EBImolecular_function  protein binding  cellular_component  biological_process  
NDEx NetworkC22orf23
Atlas of Cancer Signalling NetworkC22orf23
Wikipedia pathwaysC22orf23
Orthology - Evolution
OrthoDB84645
GeneTree (enSembl)ENSG00000128346
Phylogenetic Trees/Animal Genes : TreeFamC22orf23
HOVERGENQ9BZE7
HOGENOMQ9BZE7
Homologs : HomoloGeneC22orf23
Homology/Alignments : Family Browser (UCSC)C22orf23
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerC22orf23 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)C22orf23
dbVarC22orf23
ClinVarC22orf23
1000_GenomesC22orf23 
Exome Variant ServerC22orf23
ExAC (Exome Aggregation Consortium)C22orf23 (select the gene name)
Genetic variants : HAPMAP84645
Genomic Variants (DGV)C22orf23 [DGVbeta]
DECIPHERC22orf23 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisC22orf23 
Mutations
ICGC Data PortalC22orf23 
TCGA Data PortalC22orf23 
Broad Tumor PortalC22orf23
OASIS PortalC22orf23 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICC22orf23  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDC22orf23
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch C22orf23
DgiDB (Drug Gene Interaction Database)C22orf23
DoCM (Curated mutations)C22orf23 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)C22orf23 (select a term)
intoGenC22orf23
Cancer3DC22orf23(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenC22orf23
Genetic Testing Registry C22orf23
NextProtQ9BZE7 [Medical]
TSGene84645
GENETestsC22orf23
Target ValidationC22orf23
Huge Navigator C22orf23 [HugePedia]
snp3D : Map Gene to Disease84645
BioCentury BCIQC22orf23
ClinGenC22orf23
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD84645
Chemical/Pharm GKB GenePA38355
Clinical trialC22orf23
Miscellaneous
canSAR (ICR)C22orf23 (select the gene name)
Probes
Litterature
PubMed9 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineC22orf23
EVEXC22orf23
GoPubMedC22orf23
iHOPC22orf23
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:03:13 CEST 2017

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