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C2CD5 (C2 calcium dependent domain containing 5)

Identity

Alias (NCBI)CDP138
KIAA0528
HGNC (Hugo) C2CD5
HGNC Alias symbCDP138
HGNC Alias name138 kDa C2 domain-containing phosphoprotein
HGNC Previous nameKIAA0528
HGNC Previous nameKIAA0528
LocusID (NCBI) 9847
Atlas_Id 56216
Location 12p12.1  [Link to chromosome band 12p12]
Location_base_pair Starts at 22448546 and ends at 22544546 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
C2CD5 (12p12.1) / ITPR2 (12p12.1)C2CD5 (12p12.1) / PKP2 (12p11.21)C2CD5 (12p12.1) / PLCZ1 (12p12.3)
TEAD4 (12p13.33) / C2CD5 (12p12.1)TRAPPC9 (8q24.3) / C2CD5 (12p12.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)C2CD5   29062
Cards
Entrez_Gene (NCBI)C2CD5    C2 calcium dependent domain containing 5
AliasesCDP138; KIAA0528
GeneCards (Weizmann)C2CD5
Ensembl hg19 (Hinxton)ENSG00000111731 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000111731 [Gene_View]  ENSG00000111731 [Sequence]  chr12:22448546-22544546 [Contig_View]  C2CD5 [Vega]
ICGC DataPortalENSG00000111731
TCGA cBioPortalC2CD5
AceView (NCBI)C2CD5
Genatlas (Paris)C2CD5
SOURCE (Princeton)C2CD5
Genetics Home Reference (NIH)C2CD5
Genomic and cartography
GoldenPath hg38 (UCSC)C2CD5  -     chr12:22448546-22544546 -  12p12.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)C2CD5  -     12p12.1   [Description]    (hg19-Feb_2009)
GoldenPathC2CD5 - 12p12.1 [CytoView hg19]  C2CD5 - 12p12.1 [CytoView hg38]
ImmunoBaseENSG00000111731
Genome Data Viewer NCBIC2CD5 [Mapview hg19]  
OMIM618044   
Gene and transcription
Genbank (Entrez)AB011100 AK295862 AK299353 AK310753 AW590675
RefSeq transcript (Entrez)NM_001286173 NM_001286174 NM_001286175 NM_001286176 NM_001286177 NM_001385322 NM_001385323 NM_001385324 NM_001385325 NM_001385326 NM_001385327 NM_001385328 NM_001385329 NM_001385330 NM_001385331 NM_001385332 NM_001385333 NM_014802
Consensus coding sequences : CCDS (NCBI)C2CD5
Gene ExpressionC2CD5 [ NCBI-GEO ]   C2CD5 [ EBI - ARRAY_EXPRESS ]   C2CD5 [ SEEK ]   C2CD5 [ MEM ]
Gene Expression Viewer (FireBrowse)C2CD5 [ Firebrowse - Broad ]
GenevisibleExpression of C2CD5 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)9847
GTEX Portal (Tissue expression)C2CD5
Human Protein AtlasENSG00000111731-C2CD5 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)C2CD5
Human Protein Atlas [tissue]ENSG00000111731-C2CD5 [tissue]
HPRD11087
Protein Interaction databases
BioGRIDC2CD5
STRING (EMBL)C2CD5
ZODIACC2CD5
Ontologies - Pathways
Litterature
PubMed34 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXC2CD5
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:01:47 CEST 2021

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