Atlas of Genetics and Cytogenetics in Oncology and Haematology


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C2orf27A (chromosome 2 open reading frame 27A)

Identity

Alias_namesC2orf27
chromosome 2 open reading frame 27
Other aliasC2orf27B
HGNC (Hugo) C2orf27A
LocusID (NCBI) 29798
Atlas_Id 61150
Location 2q21.2  [Link to chromosome band 2q21]
Location_base_pair Starts at 131722491 and ends at 131767404 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)C2orf27A   25077
Cards
Entrez_Gene (NCBI)C2orf27A  29798  chromosome 2 open reading frame 27A
AliasesC2orf27; C2orf27B
GeneCards (Weizmann)C2orf27A
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr2:131722491-131767404 [Contig_View]  C2orf27A [Vega]
TCGA cBioPortalC2orf27A
AceView (NCBI)C2orf27A
Genatlas (Paris)C2orf27A
WikiGenes29798
SOURCE (Princeton)C2orf27A
Genetics Home Reference (NIH)C2orf27A
Genomic and cartography
GoldenPath hg38 (UCSC)C2orf27A  -     chr2:131722491-131767404 +  2q21.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)C2orf27A  -     2q21.2   [Description]    (hg19-Feb_2009)
GoldenPathC2orf27A - 2q21.2 [CytoView hg19]  C2orf27A - 2q21.2 [CytoView hg38]
Mapping of homologs : NCBIC2orf27A [Mapview hg19]  C2orf27A [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF038169 AI302788 AI418663 AK309649 BC071972
RefSeq transcript (Entrez)NM_001354871 NM_001354872 NM_013310
RefSeq genomic (Entrez)NC_000002 NT_187528
Consensus coding sequences : CCDS (NCBI)C2orf27A
Cluster EST : UnigeneHs.729303 [ NCBI ]
CGAP (NCI)Hs.729303
Gene ExpressionC2orf27A [ NCBI-GEO ]   C2orf27A [ EBI - ARRAY_EXPRESS ]   C2orf27A [ SEEK ]   C2orf27A [ MEM ]
Gene Expression Viewer (FireBrowse)C2orf27A [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)29798
GTEX Portal (Tissue expression)C2orf27A
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)C2orf27A
DMDM Disease mutations29798
Blocks (Seattle)C2orf27A
HPRD12811
Protein Interaction databases
BioGRIDC2orf27A
STRING (EMBL)C2orf27A
ZODIACC2orf27A
Ontologies - Pathways
Huge Navigator C2orf27A [HugePedia]
snp3D : Map Gene to Disease29798
BioCentury BCIQC2orf27A
ClinGenC2orf27A
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD29798
Chemical/Pharm GKB GenePA164717121
Clinical trialC2orf27A
Miscellaneous
canSAR (ICR)C2orf27A (select the gene name)
DataMed IndexC2orf27A
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineC2orf27A
EVEXC2orf27A
GoPubMedC2orf27A
iHOPC2orf27A
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Sep 3 15:21:54 CEST 2019

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