Atlas of Genetics and Cytogenetics in Oncology and Haematology


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C2orf66 (chromosome 2 open reading frame 66)

Identity

Alias_symbol (synonym)UNQ6411
Other aliasIIDS6411
HGNC (Hugo) C2orf66
LocusID (NCBI) 401027
Atlas_Id 61159
Location 2q33.1  [Link to chromosome band 2q33]
Location_base_pair Starts at 196804415 and ends at 196810276 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)C2orf66   33809
Cards
Entrez_Gene (NCBI)C2orf66  401027  chromosome 2 open reading frame 66
AliasesIIDS6411; UNQ6411
GeneCards (Weizmann)C2orf66
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr2:196804415-196810276 [Contig_View]  C2orf66 [Vega]
TCGA cBioPortalC2orf66
AceView (NCBI)C2orf66
Genatlas (Paris)C2orf66
WikiGenes401027
SOURCE (Princeton)C2orf66
Genetics Home Reference (NIH)C2orf66
Genomic and cartography
GoldenPath hg38 (UCSC)C2orf66  -     chr2:196804415-196810276 -  2q33.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)C2orf66  -     2q33.1   [Description]    (hg19-Feb_2009)
EnsemblC2orf66 - 2q33.1 [CytoView hg19]  C2orf66 - 2q33.1 [CytoView hg38]
Mapping of homologs : NCBIC2orf66 [Mapview hg19]  C2orf66 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AW768745 AY358249 BC137150 BC137151
RefSeq transcript (Entrez)NM_213608
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)C2orf66
Cluster EST : UnigeneHs.372069 [ NCBI ]
CGAP (NCI)Hs.372069
Gene ExpressionC2orf66 [ NCBI-GEO ]   C2orf66 [ EBI - ARRAY_EXPRESS ]   C2orf66 [ SEEK ]   C2orf66 [ MEM ]
Gene Expression Viewer (FireBrowse)C2orf66 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)401027
GTEX Portal (Tissue expression)C2orf66
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6UXQ4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6UXQ4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6UXQ4
Splice isoforms : SwissVarQ6UXQ4
PhosPhoSitePlusQ6UXQ4
Domains : Interpro (EBI)DUF4720   
Domain families : Pfam (Sanger)DUF4720 (PF15846)   
Domain families : Pfam (NCBI)pfam15846   
Conserved Domain (NCBI)C2orf66
DMDM Disease mutations401027
Blocks (Seattle)C2orf66
SuperfamilyQ6UXQ4
Peptide AtlasQ6UXQ4
HPRD13734
IPIIPI00079114   
Protein Interaction databases
DIP (DOE-UCLA)Q6UXQ4
IntAct (EBI)Q6UXQ4
BioGRIDC2orf66
STRING (EMBL)C2orf66
ZODIACC2orf66
Ontologies - Pathways
QuickGOQ6UXQ4
Ontology : AmiGOextracellular region  
Ontology : EGO-EBIextracellular region  
NDEx NetworkC2orf66
Atlas of Cancer Signalling NetworkC2orf66
Wikipedia pathwaysC2orf66
Orthology - Evolution
OrthoDB401027
Phylogenetic Trees/Animal Genes : TreeFamC2orf66
HOVERGENQ6UXQ4
HOGENOMQ6UXQ4
Homologs : HomoloGeneC2orf66
Homology/Alignments : Family Browser (UCSC)C2orf66
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerC2orf66 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)C2orf66
dbVarC2orf66
ClinVarC2orf66
1000_GenomesC2orf66 
Exome Variant ServerC2orf66
ExAC (Exome Aggregation Consortium)C2orf66 (select the gene name)
Genetic variants : HAPMAP401027
Genomic Variants (DGV)C2orf66 [DGVbeta]
DECIPHERC2orf66 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisC2orf66 
Mutations
ICGC Data PortalC2orf66 
TCGA Data PortalC2orf66 
Broad Tumor PortalC2orf66
OASIS PortalC2orf66 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICC2orf66  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDC2orf66
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch C2orf66
DgiDB (Drug Gene Interaction Database)C2orf66
DoCM (Curated mutations)C2orf66 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)C2orf66 (select a term)
intoGenC2orf66
Cancer3DC2orf66(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenC2orf66
Genetic Testing Registry C2orf66
NextProtQ6UXQ4 [Medical]
TSGene401027
GENETestsC2orf66
Target ValidationC2orf66
Huge Navigator C2orf66 [HugePedia]
snp3D : Map Gene to Disease401027
BioCentury BCIQC2orf66
ClinGenC2orf66
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD401027
Chemical/Pharm GKB GenePA162379428
Clinical trialC2orf66
Miscellaneous
canSAR (ICR)C2orf66 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineC2orf66
EVEXC2orf66
GoPubMedC2orf66
iHOPC2orf66
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 15:41:09 CEST 2017

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