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C2orf68 (chromosome 2 open reading frame 68)

Identity

Other aliasHCRCN81
HGNC (Hugo) C2orf68
LocusID (NCBI) 388969
Atlas_Id 52558
Location 2p11.2  [Link to chromosome band 2p11]
Location_base_pair Starts at 85832376 and ends at 85839179 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)C2orf68   34353
Cards
Entrez_Gene (NCBI)C2orf68  388969  chromosome 2 open reading frame 68
AliasesHCRCN81
GeneCards (Weizmann)C2orf68
Ensembl hg19 (Hinxton)ENSG00000168887 [Gene_View]  chr2:85832376-85839179 [Contig_View]  C2orf68 [Vega]
Ensembl hg38 (Hinxton)ENSG00000168887 [Gene_View]  chr2:85832376-85839179 [Contig_View]  C2orf68 [Vega]
ICGC DataPortalENSG00000168887
TCGA cBioPortalC2orf68
AceView (NCBI)C2orf68
Genatlas (Paris)C2orf68
WikiGenes388969
SOURCE (Princeton)C2orf68
Genetics Home Reference (NIH)C2orf68
Genomic and cartography
GoldenPath hg19 (UCSC)C2orf68  -     chr2:85832376-85839179 -  2p11.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)C2orf68  -     2p11.2   [Description]    (hg38-Dec_2013)
EnsemblC2orf68 - 2p11.2 [CytoView hg19]  C2orf68 - 2p11.2 [CytoView hg38]
Mapping of homologs : NCBIC2orf68 [Mapview hg19]  C2orf68 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK024174 AK092972 AK124808 AK300003 AK311297
RefSeq transcript (Entrez)NM_001013649
RefSeq genomic (Entrez)NC_000002 NC_018913 NT_022184 NW_004929300
Consensus coding sequences : CCDS (NCBI)C2orf68
Cluster EST : UnigeneHs.516159 [ NCBI ]
CGAP (NCI)Hs.516159
Alternative Splicing GalleryENSG00000168887
Gene ExpressionC2orf68 [ NCBI-GEO ]   C2orf68 [ EBI - ARRAY_EXPRESS ]   C2orf68 [ SEEK ]   C2orf68 [ MEM ]
Gene Expression Viewer (FireBrowse)C2orf68 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)388969
GTEX Portal (Tissue expression)C2orf68
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ2NKX9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ2NKX9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ2NKX9
Splice isoforms : SwissVarQ2NKX9
PhosPhoSitePlusQ2NKX9
Domains : Interpro (EBI)UPF0561   
Domain families : Pfam (Sanger)UPF0561 (PF10573)   
Domain families : Pfam (NCBI)pfam10573   
Conserved Domain (NCBI)C2orf68
DMDM Disease mutations388969
Blocks (Seattle)C2orf68
SuperfamilyQ2NKX9
Human Protein AtlasENSG00000168887
Peptide AtlasQ2NKX9
HPRD18391
IPIIPI00419111   IPI00874184   IPI00645115   IPI00925018   
Protein Interaction databases
DIP (DOE-UCLA)Q2NKX9
IntAct (EBI)Q2NKX9
FunCoupENSG00000168887
BioGRIDC2orf68
STRING (EMBL)C2orf68
ZODIACC2orf68
Ontologies - Pathways
QuickGOQ2NKX9
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkC2orf68
Atlas of Cancer Signalling NetworkC2orf68
Wikipedia pathwaysC2orf68
Orthology - Evolution
OrthoDB388969
GeneTree (enSembl)ENSG00000168887
Phylogenetic Trees/Animal Genes : TreeFamC2orf68
HOVERGENQ2NKX9
HOGENOMQ2NKX9
Homologs : HomoloGeneC2orf68
Homology/Alignments : Family Browser (UCSC)C2orf68
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerC2orf68 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)C2orf68
dbVarC2orf68
ClinVarC2orf68
1000_GenomesC2orf68 
Exome Variant ServerC2orf68
ExAC (Exome Aggregation Consortium)C2orf68 (select the gene name)
Genetic variants : HAPMAP388969
Genomic Variants (DGV)C2orf68 [DGVbeta]
DECIPHER (Syndromes)2:85832376-85839179  ENSG00000168887
CONAN: Copy Number AnalysisC2orf68 
Mutations
ICGC Data PortalC2orf68 
TCGA Data PortalC2orf68 
Broad Tumor PortalC2orf68
OASIS PortalC2orf68 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICC2orf68  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDC2orf68
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch C2orf68
DgiDB (Drug Gene Interaction Database)C2orf68
DoCM (Curated mutations)C2orf68 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)C2orf68 (select a term)
intoGenC2orf68
Cancer3DC2orf68(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenC2orf68
Genetic Testing Registry C2orf68
NextProtQ2NKX9 [Medical]
TSGene388969
GENETestsC2orf68
Huge Navigator C2orf68 [HugePedia]
snp3D : Map Gene to Disease388969
BioCentury BCIQC2orf68
ClinGenC2orf68
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD388969
Chemical/Pharm GKB GenePA162379474
Clinical trialC2orf68
Miscellaneous
canSAR (ICR)C2orf68 (select the gene name)
Probes
Litterature
PubMed9 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineC2orf68
EVEXC2orf68
GoPubMedC2orf68
iHOPC2orf68
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Mar 30 14:54:36 CEST 2017

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