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C2orf69 (chromosome 2 open reading frame 69)

Identity

Alias_symbol (synonym)FLJ38973
Other alias-
HGNC (Hugo) C2orf69
LocusID (NCBI) 205327
Atlas_Id 61160
Location 2q33.1  [Link to chromosome band 2q33]
Location_base_pair Starts at 199911256 and ends at 199928273 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)C2orf69   26799
Cards
Entrez_Gene (NCBI)C2orf69  205327  chromosome 2 open reading frame 69
Aliases
GeneCards (Weizmann)C2orf69
Ensembl hg19 (Hinxton)ENSG00000178074 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000178074 [Gene_View]  chr2:199911256-199928273 [Contig_View]  C2orf69 [Vega]
ICGC DataPortalENSG00000178074
TCGA cBioPortalC2orf69
AceView (NCBI)C2orf69
Genatlas (Paris)C2orf69
WikiGenes205327
SOURCE (Princeton)C2orf69
Genetics Home Reference (NIH)C2orf69
Genomic and cartography
GoldenPath hg38 (UCSC)C2orf69  -     chr2:199911256-199928273 +  2q33.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)C2orf69  -     2q33.1   [Description]    (hg19-Feb_2009)
EnsemblC2orf69 - 2q33.1 [CytoView hg19]  C2orf69 - 2q33.1 [CytoView hg38]
Mapping of homologs : NCBIC2orf69 [Mapview hg19]  C2orf69 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK096292 AK303210 BC036456 DA773166 HQ447114
RefSeq transcript (Entrez)NM_153689
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)C2orf69
Cluster EST : UnigeneHs.471040 [ NCBI ]
CGAP (NCI)Hs.471040
Alternative Splicing GalleryENSG00000178074
Gene ExpressionC2orf69 [ NCBI-GEO ]   C2orf69 [ EBI - ARRAY_EXPRESS ]   C2orf69 [ SEEK ]   C2orf69 [ MEM ]
Gene Expression Viewer (FireBrowse)C2orf69 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)205327
GTEX Portal (Tissue expression)C2orf69
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N8R5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N8R5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N8R5
Splice isoforms : SwissVarQ8N8R5
PhosPhoSitePlusQ8N8R5
Domains : Interpro (EBI)UPF0565   
Domain families : Pfam (Sanger)UPF0565 (PF10561)   
Domain families : Pfam (NCBI)pfam10561   
Conserved Domain (NCBI)C2orf69
DMDM Disease mutations205327
Blocks (Seattle)C2orf69
SuperfamilyQ8N8R5
Human Protein AtlasENSG00000178074
Peptide AtlasQ8N8R5
HPRD08797
IPIIPI00167546   
Protein Interaction databases
DIP (DOE-UCLA)Q8N8R5
IntAct (EBI)Q8N8R5
FunCoupENSG00000178074
BioGRIDC2orf69
STRING (EMBL)C2orf69
ZODIACC2orf69
Ontologies - Pathways
QuickGOQ8N8R5
Ontology : AmiGOextracellular region  
Ontology : EGO-EBIextracellular region  
NDEx NetworkC2orf69
Atlas of Cancer Signalling NetworkC2orf69
Wikipedia pathwaysC2orf69
Orthology - Evolution
OrthoDB205327
GeneTree (enSembl)ENSG00000178074
Phylogenetic Trees/Animal Genes : TreeFamC2orf69
HOVERGENQ8N8R5
HOGENOMQ8N8R5
Homologs : HomoloGeneC2orf69
Homology/Alignments : Family Browser (UCSC)C2orf69
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerC2orf69 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)C2orf69
dbVarC2orf69
ClinVarC2orf69
1000_GenomesC2orf69 
Exome Variant ServerC2orf69
ExAC (Exome Aggregation Consortium)C2orf69 (select the gene name)
Genetic variants : HAPMAP205327
Genomic Variants (DGV)C2orf69 [DGVbeta]
DECIPHERC2orf69 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisC2orf69 
Mutations
ICGC Data PortalC2orf69 
TCGA Data PortalC2orf69 
Broad Tumor PortalC2orf69
OASIS PortalC2orf69 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICC2orf69  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDC2orf69
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch C2orf69
DgiDB (Drug Gene Interaction Database)C2orf69
DoCM (Curated mutations)C2orf69 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)C2orf69 (select a term)
intoGenC2orf69
Cancer3DC2orf69(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenC2orf69
Genetic Testing Registry C2orf69
NextProtQ8N8R5 [Medical]
TSGene205327
GENETestsC2orf69
Target ValidationC2orf69
Huge Navigator C2orf69 [HugePedia]
snp3D : Map Gene to Disease205327
BioCentury BCIQC2orf69
ClinGenC2orf69
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD205327
Chemical/Pharm GKB GenePA162379487
Clinical trialC2orf69
Miscellaneous
canSAR (ICR)C2orf69 (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineC2orf69
EVEXC2orf69
GoPubMedC2orf69
iHOPC2orf69
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 15:41:09 CEST 2017

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