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C2orf73 (chromosome 2 open reading frame 73)

Identity

Alias_symbol (synonym)FLJ40298
Other alias-
HGNC (Hugo) C2orf73
LocusID (NCBI) 129852
Atlas_Id 61164
Location 2p16.2  [Link to chromosome band 2p16]
Location_base_pair Starts at 54330934 and ends at 54361577 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)C2orf73   26861
Cards
Entrez_Gene (NCBI)C2orf73  129852  chromosome 2 open reading frame 73
Aliases
GeneCards (Weizmann)C2orf73
Ensembl hg19 (Hinxton)ENSG00000177994 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000177994 [Gene_View]  chr2:54330934-54361577 [Contig_View]  C2orf73 [Vega]
ICGC DataPortalENSG00000177994
TCGA cBioPortalC2orf73
AceView (NCBI)C2orf73
Genatlas (Paris)C2orf73
WikiGenes129852
SOURCE (Princeton)C2orf73
Genetics Home Reference (NIH)C2orf73
Genomic and cartography
GoldenPath hg38 (UCSC)C2orf73  -     chr2:54330934-54361577 +  2p16.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)C2orf73  -     2p16.2   [Description]    (hg19-Feb_2009)
EnsemblC2orf73 - 2p16.2 [CytoView hg19]  C2orf73 - 2p16.2 [CytoView hg38]
Mapping of homologs : NCBIC2orf73 [Mapview hg19]  C2orf73 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK097617 BC031669 BC126244 BC126246 BC144191
RefSeq transcript (Entrez)NM_001100396 NM_173486
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)C2orf73
Cluster EST : UnigeneHs.732626 [ NCBI ]
CGAP (NCI)Hs.732626
Alternative Splicing GalleryENSG00000177994
Gene ExpressionC2orf73 [ NCBI-GEO ]   C2orf73 [ EBI - ARRAY_EXPRESS ]   C2orf73 [ SEEK ]   C2orf73 [ MEM ]
Gene Expression Viewer (FireBrowse)C2orf73 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)129852
GTEX Portal (Tissue expression)C2orf73
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N5S3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N5S3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N5S3
Splice isoforms : SwissVarQ8N5S3
PhosPhoSitePlusQ8N5S3
Domains : Interpro (EBI)GDWWSH   
Domain families : Pfam (Sanger)GDWWSH (PF15667)   
Domain families : Pfam (NCBI)pfam15667   
Conserved Domain (NCBI)C2orf73
DMDM Disease mutations129852
Blocks (Seattle)C2orf73
SuperfamilyQ8N5S3
Human Protein AtlasENSG00000177994
Peptide AtlasQ8N5S3
HPRD13446
IPIIPI00856014   IPI00872568   IPI00893113   IPI00893498   IPI00893148   IPI00892798   IPI00946862   
Protein Interaction databases
DIP (DOE-UCLA)Q8N5S3
IntAct (EBI)Q8N5S3
FunCoupENSG00000177994
BioGRIDC2orf73
STRING (EMBL)C2orf73
ZODIACC2orf73
Ontologies - Pathways
QuickGOQ8N5S3
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkC2orf73
Atlas of Cancer Signalling NetworkC2orf73
Wikipedia pathwaysC2orf73
Orthology - Evolution
OrthoDB129852
GeneTree (enSembl)ENSG00000177994
Phylogenetic Trees/Animal Genes : TreeFamC2orf73
HOVERGENQ8N5S3
HOGENOMQ8N5S3
Homologs : HomoloGeneC2orf73
Homology/Alignments : Family Browser (UCSC)C2orf73
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerC2orf73 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)C2orf73
dbVarC2orf73
ClinVarC2orf73
1000_GenomesC2orf73 
Exome Variant ServerC2orf73
ExAC (Exome Aggregation Consortium)C2orf73 (select the gene name)
Genetic variants : HAPMAP129852
Genomic Variants (DGV)C2orf73 [DGVbeta]
DECIPHERC2orf73 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisC2orf73 
Mutations
ICGC Data PortalC2orf73 
TCGA Data PortalC2orf73 
Broad Tumor PortalC2orf73
OASIS PortalC2orf73 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICC2orf73  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDC2orf73
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch C2orf73
DgiDB (Drug Gene Interaction Database)C2orf73
DoCM (Curated mutations)C2orf73 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)C2orf73 (select a term)
intoGenC2orf73
Cancer3DC2orf73(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenC2orf73
Genetic Testing Registry C2orf73
NextProtQ8N5S3 [Medical]
TSGene129852
GENETestsC2orf73
Target ValidationC2orf73
Huge Navigator C2orf73 [HugePedia]
snp3D : Map Gene to Disease129852
BioCentury BCIQC2orf73
ClinGenC2orf73
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD129852
Chemical/Pharm GKB GenePA162379532
Clinical trialC2orf73
Miscellaneous
canSAR (ICR)C2orf73 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineC2orf73
EVEXC2orf73
GoPubMedC2orf73
iHOPC2orf73
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:03:17 CEST 2017

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