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C2orf76 (chromosome 2 open reading frame 76)

Identity

Alias_symbol (synonym)MGC104437
LOC130355
AIM29
Other alias
HGNC (Hugo) C2orf76
LocusID (NCBI) 130355
Atlas_Id 61166
Location 2q14.2  [Link to chromosome band 2q14]
Location_base_pair Starts at 120060020 and ends at 120124258 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
LOC100507412 (-) / C2orf76 (2q14.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)C2orf76   27017
Cards
Entrez_Gene (NCBI)C2orf76  130355  chromosome 2 open reading frame 76
AliasesAIM29
GeneCards (Weizmann)C2orf76
Ensembl hg19 (Hinxton)ENSG00000186132 [Gene_View]  chr2:120060020-120124258 [Contig_View]  C2orf76 [Vega]
Ensembl hg38 (Hinxton)ENSG00000186132 [Gene_View]  chr2:120060020-120124258 [Contig_View]  C2orf76 [Vega]
ICGC DataPortalENSG00000186132
TCGA cBioPortalC2orf76
AceView (NCBI)C2orf76
Genatlas (Paris)C2orf76
WikiGenes130355
SOURCE (Princeton)C2orf76
Genetics Home Reference (NIH)C2orf76
Genomic and cartography
GoldenPath hg19 (UCSC)C2orf76  -     chr2:120060020-120124258 -  2q14.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)C2orf76  -     2q14.2   [Description]    (hg38-Dec_2013)
EnsemblC2orf76 - 2q14.2 [CytoView hg19]  C2orf76 - 2q14.2 [CytoView hg38]
Mapping of homologs : NCBIC2orf76 [Mapview hg19]  C2orf76 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC047365 BC062434 BC105805 BC126395 BC126397
RefSeq transcript (Entrez)NM_001017927
RefSeq genomic (Entrez)NC_000002 NC_018913 NT_005403 NW_004929304
Consensus coding sequences : CCDS (NCBI)C2orf76
Cluster EST : UnigeneHs.99488 [ NCBI ]
CGAP (NCI)Hs.99488
Alternative Splicing GalleryENSG00000186132
Gene ExpressionC2orf76 [ NCBI-GEO ]   C2orf76 [ EBI - ARRAY_EXPRESS ]   C2orf76 [ SEEK ]   C2orf76 [ MEM ]
Gene Expression Viewer (FireBrowse)C2orf76 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)130355
GTEX Portal (Tissue expression)C2orf76
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ3KRA6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ3KRA6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ3KRA6
Splice isoforms : SwissVarQ3KRA6
PhosPhoSitePlusQ3KRA6
Domains : Interpro (EBI)UPF0538   
Domain families : Pfam (Sanger)DUF2340 (PF10209)   
Domain families : Pfam (NCBI)pfam10209   
Conserved Domain (NCBI)C2orf76
DMDM Disease mutations130355
Blocks (Seattle)C2orf76
SuperfamilyQ3KRA6
Human Protein AtlasENSG00000186132
Peptide AtlasQ3KRA6
HPRD18547
IPIIPI00046682   IPI00917539   
Protein Interaction databases
DIP (DOE-UCLA)Q3KRA6
IntAct (EBI)Q3KRA6
FunCoupENSG00000186132
BioGRIDC2orf76
STRING (EMBL)C2orf76
ZODIACC2orf76
Ontologies - Pathways
QuickGOQ3KRA6
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkC2orf76
Atlas of Cancer Signalling NetworkC2orf76
Wikipedia pathwaysC2orf76
Orthology - Evolution
OrthoDB130355
GeneTree (enSembl)ENSG00000186132
Phylogenetic Trees/Animal Genes : TreeFamC2orf76
HOVERGENQ3KRA6
HOGENOMQ3KRA6
Homologs : HomoloGeneC2orf76
Homology/Alignments : Family Browser (UCSC)C2orf76
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerC2orf76 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)C2orf76
dbVarC2orf76
ClinVarC2orf76
1000_GenomesC2orf76 
Exome Variant ServerC2orf76
ExAC (Exome Aggregation Consortium)C2orf76 (select the gene name)
Genetic variants : HAPMAP130355
Genomic Variants (DGV)C2orf76 [DGVbeta]
DECIPHER (Syndromes)2:120060020-120124258  ENSG00000186132
CONAN: Copy Number AnalysisC2orf76 
Mutations
ICGC Data PortalC2orf76 
TCGA Data PortalC2orf76 
Broad Tumor PortalC2orf76
OASIS PortalC2orf76 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICC2orf76  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDC2orf76
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch C2orf76
DgiDB (Drug Gene Interaction Database)C2orf76
DoCM (Curated mutations)C2orf76 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)C2orf76 (select a term)
intoGenC2orf76
Cancer3DC2orf76(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenC2orf76
Genetic Testing Registry C2orf76
NextProtQ3KRA6 [Medical]
TSGene130355
GENETestsC2orf76
Huge Navigator C2orf76 [HugePedia]
snp3D : Map Gene to Disease130355
BioCentury BCIQC2orf76
ClinGenC2orf76
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD130355
Chemical/Pharm GKB GenePA162379558
Clinical trialC2orf76
Miscellaneous
canSAR (ICR)C2orf76 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineC2orf76
EVEXC2orf76
GoPubMedC2orf76
iHOPC2orf76
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 11:57:16 CET 2017

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